RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Topaz1E5FYH1 1653 aa11.47□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Tnrc6bQ8BKI2 1810 aaKnown RBP11.46□□□□□ -0.57
Clcn3-205ENSMUST00000110302 Zbtb4Q5F293 982 aa11.46□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Atf7ipQ7TT18 1306 aa11.46□□□□□ -0.58
Clcn3-205ENSMUST00000110302 D430041D05RikF6ZGR6 1678 aa11.45□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Rab3gap2Q8BMG7 1366 aa11.45□□□□□ -0.58
Clcn3-205ENSMUST00000110302 CenpjQ569L8 1344 aa11.45□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Pcdh10E9PXQ7 1057 aa11.45□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Rpgrip1lQ8CG73 1264 aa11.45□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Shq1Q7TMX5 569 aa11.45□□□□□ -0.58
Clcn3-205ENSMUST00000110302 N4bp2F8VQG7 1678 aaKnown RBP11.44□□□□□ -0.58
Clcn3-205ENSMUST00000110302 IqubQ8CDK3 788 aa11.44□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Stag3O70576 1240 aa11.44□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Kif20bQ80WE4 1774 aaKnown RBP11.43□□□□□ -0.58
Clcn3-205ENSMUST00000110302 IghaA0A0A6YXW6 389 aa11.43□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Pik3r4Q8VD65 1358 aa11.43□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Slc24a1Q91WD8 1130 aa11.43□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Kif1aP33173 1695 aa11.42□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Ppp2r1aQ76MZ3 589 aa11.42□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Q9D9H8 365 aa11.41□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Als2Q920R0 1651 aa11.41□□□□□ -0.58
Clcn3-205ENSMUST00000110302 PzpQ61838 1495 aa11.41□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Tnnt3Q9QZ47 272 aa11.41□□□□□ -0.58
Clcn3-205ENSMUST00000110302 C5P06684 1680 aa11.4□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Thsd7aQ69ZU6 1645 aa11.4□□□□□ -0.58
Clcn3-205ENSMUST00000110302 Mdc1Q5PSV9 1707 aa11.4□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Zscan21Q07231 555 aa11.4□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Q7TT23 1179 aa11.4□□□□□ -0.59
Clcn3-205ENSMUST00000110302 NrdcQ8BHG1 1161 aa11.4□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Scaf11E9PZM7 1456 aaKnown RBP11.39□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Rreb1Q3UH06 1700 aaKnown RBP11.39□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Rims2Q9EQZ7 1530 aa11.39□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Mon2Q80TL7 1715 aa11.38□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Rimbp3Q3V0F0 1606 aa11.38□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Phlpp1Q8CHE4 1687 aa11.38□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Kif7B7ZNG0 1348 aa11.38□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Anp32bQ9EST5 272 aaKnown RBP11.38□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Asxl2Q8BZ32 1370 aa11.37□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Med1Q925J9 1575 aa11.37□□□□□ -0.59
Clcn3-205ENSMUST00000110302 PtpruB1AUH1 1446 aa11.36□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Unc13bQ9Z1N9 1602 aa11.36□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Stk26Q99JT2 416 aa11.36□□□□□ -0.59
Clcn3-205ENSMUST00000110302 NalcnQ8BXR5 1738 aa11.35□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Utp14aQ640M1 767 aaKnown RBP11.35□□□□□ -0.59
Clcn3-205ENSMUST00000110302 IbtkQ6ZPR6 1352 aaKnown RBP11.34□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Kiaa1107Q80TK0 1369 aa11.34□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Dcaf11Q91VU6 549 aa11.34□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Atp2b2Q9R0K7 1198 aa11.34□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Gsto1O09131 240 aa11.33□□□□□ -0.59
Clcn3-205ENSMUST00000110302 Iqsec2Q5DU25 1478 aa11.33□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Psme1P97371 249 aa11.33□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Chd4Q6PDQ2 1915 aaKnown RBP11.33□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Txndc2Q6P902 515 aa11.33□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Cdk19Q8BWD8 501 aa11.33□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Mink1Q9JM52 1308 aa11.33□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Usp19Q3UJD6 1360 aa11.32□□□□□ -0.6
Clcn3-205ENSMUST00000110302 FanciQ8K368 1330 aa11.32□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Mak16Q8BGS0 296 aaKnown RBP11.32□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Safb2Q80YR5 991 aaKnown RBP11.32□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Atp1b4Q99ME6 356 aa11.32□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Ttc41Q692V3 1318 aa11.31□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Spef2Q8C9J3 1734 aa11.31□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Sirt1Q923E4 737 aa11.31□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Scn7aB1AYL1 1681 aa11.31□□□□□ -0.6
Clcn3-205ENSMUST00000110302 P3h3Q8CG70 732 aa11.3□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Map3k19E9Q3S4 1311 aa11.3□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Kank1E9Q238 1360 aa11.3□□□□□ -0.6
Clcn3-205ENSMUST00000110302 P2rx7Q9Z1M0 595 aa11.3□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Ubr1O70481 1757 aa11.3□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Cnga1P29974 684 aa11.3□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Zranb1Q7M760 708 aa11.29□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Pik3c2aQ61194 1686 aa11.29□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Abcc10Q8R4P9 1501 aa11.29□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Csrnp3P59055 597 aa11.29□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Znf541Q0GGX2 1363 aa11.29□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Ofd1Q80Z25 1017 aa11.29□□□□□ -0.6
Clcn3-205ENSMUST00000110302 NinlQ6ZQ12 1394 aa11.29□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Cald1E9QA15 768 aaKnown RBP11.28□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Zfp444Q3TDV8 331 aaKnown RBP11.28□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Exosc9Q9JHI7 438 aaKnown RBP11.28□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Col14a1Q80X19 1797 aa11.28□□□□□ -0.6
Clcn3-205ENSMUST00000110302 Fam135bQ9DAI6 1403 aa11.27□□□□□ -0.6
Clcn3-205ENSMUST00000110302 GphnQ8BUV3 769 aaKnown RBP11.27□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Map2P20357 1828 aa11.26□□□□□ -0.61
Clcn3-205ENSMUST00000110302 C3P01027 1663 aa11.26□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Idi2Q8BFZ6 227 aa11.26□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Nrxn3Q6P9K9 1571 aa11.25□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Col16a1Q8BLX7 1580 aa11.25□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Erbb3Q61526 1339 aa11.25□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Esx1O88933 382 aa11.25□□□□□ -0.61
Clcn3-205ENSMUST00000110302 L3mbtl2P59178 703 aa11.25□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Map4k4P97820 1233 aaKnown RBP11.25□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Znf335A2A5K6 1337 aa11.24□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Ncbp3Q8BZR9 615 aaKnown RBP11.24□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Sipa1l2Q80TE4 1722 aa11.24□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Wnk3Q80XP9 1757 aa11.23□□□□□ -0.61
Clcn3-205ENSMUST00000110302 HnrnpmQ9D0E1 729 aaKnown RBP11.23□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Kif16bB1AVY7 1312 aa11.23□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Camta1A2A891 1682 aa11.22□□□□□ -0.61
Clcn3-205ENSMUST00000110302 Brwd3A2AHJ4 1799 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms