RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Ssh2Q5SW75 1423 aa12.99□□□□□ -0.33
Scn8a-202ENSMUST00000096198 CntlnA2AM05 1397 aa12.99□□□□□ -0.33
Scn8a-202ENSMUST00000096198 HnrnpmQ9D0E1 729 aaKnown RBP12.99□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Prdm2A2A7B5 1709 aaKnown RBP12.99□□□□□ -0.33
Scn8a-202ENSMUST00000096198 PtprgQ05909 1442 aa12.98□□□□□ -0.33
Scn8a-202ENSMUST00000096198 VwdeQ6DFV8 926 aa12.98□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Usp32F8VPZ3 1604 aa12.98□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Sipa1l2Q80TE4 1722 aa12.97□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Cdk11bP24788 784 aaKnown RBP12.97□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Kif1bQ60575 1816 aaKnown RBP12.97□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Rad23bP54728 416 aa12.96□□□□□ -0.33
Scn8a-202ENSMUST00000096198 Pde4cQ3UEI1 686 aa12.96□□□□□ -0.33
Scn8a-202ENSMUST00000096198 DccP70211 1447 aa12.96□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Farp2Q91VS8 1065 aa12.95□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Shank2Q80Z38 1476 aa12.95□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Ppip5k1A2ARP1 1436 aa12.95□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Eea1Q8BL66 1411 aa12.95□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Cd109Q8R422 1442 aa12.95□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Fam135bQ9DAI6 1403 aa12.95□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Rreb1Q3UH06 1700 aaKnown RBP12.94□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Trap1aP19473 224 aa12.94□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Sgip1Q8VD37 806 aa12.94□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Ttc21bQ0HA38 1315 aa12.93□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Atp7aQ64430 1491 aa12.93□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Prrc2bQ7TPM1 1486 aaKnown RBP12.93□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Tns2Q8CGB6 1400 aa12.92□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Bcl9lQ67FY2 1494 aa12.91□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Astn2Q80Z10 1352 aa12.91□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Zswim8Q3UHH1 1832 aaKnown RBP12.9□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Ccdc129Q14B48 1034 aa12.9□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Cacna1sQ02789 1880 aa12.9□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Nup153E9Q3G8 1462 aaKnown RBP12.9□□□□□ -0.34
Scn8a-202ENSMUST00000096198 Hirip3Q8BLH7 601 aa12.88□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Ildr1Q8CBR1 537 aa12.88□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Itsn2Q9Z0R6 1659 aa12.87□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Cep170bQ80U49 1574 aa12.87□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Gm10563F6WIE4 79 aa12.87□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Taok3Q8BYC6 898 aa12.87□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Atp1b4Q99ME6 356 aa12.87□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Itgb4A2A863 1818 aa12.87□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Ift172Q6VH22 1749 aa12.87□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Wnk3Q80XP9 1757 aa12.86□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Erich6D3Z6S9 713 aa12.86□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Kcna6Q61923 529 aa12.86□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Nrxn1Q9CS84 1514 aa12.86□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Atp10bB1AWN4 1474 aa12.85□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Q9D9H8 365 aa12.85□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Mtus2Q3UHD3 1353 aa12.84□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Stk24Q99KH8 431 aa12.84□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Ttll5Q8CHB8 1328 aa12.84□□□□□ -0.35
Scn8a-202ENSMUST00000096198 Mast2Q60592 1734 aa12.83□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Naip1Q9QWK5 1403 aa12.83□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Abcc5Q9R1X5 1436 aa12.83□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Pik3c2gO70167 1506 aa12.83□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Rab3gap2Q8BMG7 1366 aa12.82□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Rgs19Q9CX84 216 aa12.82□□□□□ -0.36
Scn8a-202ENSMUST00000096198 PtpruB1AUH1 1446 aa12.81□□□□□ -0.36
Scn8a-202ENSMUST00000096198 AnkarA2RT91 1465 aa12.81□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Sirt1Q923E4 737 aa12.81□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Txnrd1Q9JMH6 613 aa12.81□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Shank3Q4ACU6 1730 aa12.81□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Gpr162Q3UN16 588 aa12.79□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Ppp6r1Q7TSI3 856 aa12.79□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Cabp1Q9JLK7 227 aa12.79□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Kif20bQ80WE4 1774 aaKnown RBP12.79□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Pola1P33609 1465 aa12.78□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Atp7bQ64446 1462 aa12.78□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Fer1l6E0CZ42 1862 aa12.78□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Myom1Q62234 1667 aaKnown RBP12.78□□□□□ -0.36
Scn8a-202ENSMUST00000096198 Erbb3Q61526 1339 aa12.77□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Nckap5lQ6GQX2 1323 aa12.77□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Snapc4Q8BP86 1333 aa12.76□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Mia2Q91ZV0 1396 aa12.76□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Lama2Q60675 3118 aaKnown RBP12.76□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Abca15E9PWH4 1668 aa12.75□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Cdhr2E9Q7P9 1308 aa12.75□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Pik3r4Q8VD65 1358 aa12.74□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Sall3Q62255 1320 aa12.74□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Sox12Q04890 314 aa12.74□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Adgre1Q61549 931 aa12.74□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Egfem1Q8C088 590 aa12.74□□□□□ -0.37
Scn8a-202ENSMUST00000096198 AtrnQ9WU60 1428 aa12.73□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Zmym3Q9JLM4 1370 aa12.73□□□□□ -0.37
Scn8a-202ENSMUST00000096198 GakQ99KY4 1305 aa12.73□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Cadps2Q8BYR5 1297 aa12.73□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Chic2Q9D9G3 165 aa12.72□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Mroh1E0CZ22 1640 aa12.72□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Nfat5Q9WV30 1534 aa12.72□□□□□ -0.37
Scn8a-202ENSMUST00000096198 GalcP54818 684 aa12.71□□□□□ -0.37
Scn8a-202ENSMUST00000096198 Rtl5Q5DTT4 599 aa12.71□□□□□ -0.37
Scn8a-202ENSMUST00000096198 4930523C07RikE9Q2T4 99 aa12.7□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Shq1Q7TMX5 569 aa12.7□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Cps1Q8C196 1500 aa12.69□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Vars2Q3U2A8 1060 aa12.69□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Ppp1r1bQ60829 194 aa12.69□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Iqgap3F8VQ29 1632 aa12.69□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Emilin1Q99K41 1017 aa12.68□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Fchsd2Q3USJ8 740 aa12.67□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Ppm1fQ8CGA0 452 aa12.67□□□□□ -0.38
Scn8a-202ENSMUST00000096198 Lrit1Q8K099 624 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms