RNA–Protein interactions for RNA: ENSMUST00000063006.11

Ccdc42-201, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 5 BASIC

Gene Ccdc42, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-201ENSMUST00000063006 Tom1O88746 492 aa12.64□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Slc52a2Q9D8F3 450 aa12.64□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Erich6D3Z6S9 713 aa12.63□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Srcin1Q9QWI6 1250 aa12.63□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Sbno1Q689Z5 1390 aa12.63□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 AatkQ80YE4 1365 aa12.63□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Ehbp1l1Q99MS7 1716 aa12.62□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Asxl2Q8BZ32 1370 aa12.61□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Gm20521D3Z5F7 333 aa12.61□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Srpk2O54781 681 aaKnown RBP12.61□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 P3h3Q8CG70 732 aa12.61□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Psme1P97371 249 aa12.6□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Gimap5Q8BWF2 308 aa12.59□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 Pola1P33609 1465 aa12.59□□□□□ -0.39
Ccdc42-201ENSMUST00000063006 PnisrA2AJT4 805 aaKnown RBP12.58□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Nphp4P59240 1425 aa12.58□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Lmtk3Q5XJV6 1424 aa12.58□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Stk24Q99KH8 431 aa12.58□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Arap3Q8R5G7 1538 aa12.57□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Tmf1B9EKI3 1091 aa12.57□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 NrdcQ8BHG1 1161 aa12.57□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Gtf2e1Q9D0D5 440 aa12.57□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Prrc2bQ7TPM1 1486 aaKnown RBP12.57□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Plxnc1Q9QZC2 1574 aa12.56□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 PalldQ9ET54 1408 aa12.56□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Evi5lH3BKQ3 813 aa12.56□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Slain2Q8CI08 581 aa12.56□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Nhsl1Q8CAF4 1587 aa12.56□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Mroh1E0CZ22 1640 aa12.55□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Ttll13A4Q9F6 804 aa12.55□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Kdm2aP59997 1161 aa12.55□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Tns3Q5SSZ5 1440 aa12.54□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Sema6bO54951 886 aa12.54□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 WdpcpQ8C456 722 aa12.54□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Os9Q8K2C7 672 aa12.54□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Sall3Q62255 1320 aa12.54□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Slit3Q9WVB4 1523 aa12.53□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Arhgef28P97433 1693 aa12.52□□□□□ -0.4
Ccdc42-201ENSMUST00000063006 Qtrt2B8ZXI1 415 aa12.52□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 IqubQ8CDK3 788 aa12.52□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Mrs2Q5NCE8 434 aa12.51□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Fnbp4Q6ZQ03 1031 aa12.51□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Usp40Q8BWR4 1235 aa12.51□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Slc5a4bQ91ZP4 660 aa12.51□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Cntnap1O54991 1385 aa12.51□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Puf60Q3UEB3 564 aaKnown RBP12.5□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Itsn2Q9Z0R6 1659 aa12.5□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 PrxO55103 1391 aa12.49□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Fan1Q69ZT1 1020 aa12.49□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Zfp142G5E869 1843 aa12.48□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 PtprvP70289 1705 aa12.48□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Znf710Q3U288 666 aa12.48□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Exoc6Q8R313 802 aa12.48□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Ildr2B5TVM2 661 aa12.47□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Fam184bQ0KK56 942 aa12.47□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Pank3Q8R2W9 370 aa12.47□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Lrp6O88572 1613 aa12.47□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Unc13bQ9Z1N9 1602 aa12.47□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Col14a1Q80X19 1797 aa12.46□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Myom1Q62234 1667 aaKnown RBP12.46□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 AU022751B1B0V2 589 aa12.46□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Zscan10Q3URR7 782 aa12.46□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Wwc2Q6NXJ0 1187 aa12.46□□□□□ -0.41
Ccdc42-201ENSMUST00000063006 Adgrl1Q80TR1 1466 aa12.46□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 InsrP15208 1372 aa12.45□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Siglec1Q62230 1695 aa12.45□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 CenpjQ569L8 1344 aa12.45□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Gprasp1Q5U4C1 1347 aa12.45□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Slc4a2P13808 1237 aaKnown RBP12.45□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Znf526Q8BI66 675 aa12.45□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 MypopQ8R4U1 393 aa12.45□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Gm16486A0A1D5RMD1 1434 aa12.45□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Tmem94Q7TSH8 1360 aa12.44□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Cdk5rap2Q8K389 1822 aa12.44□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Nwd1A6H603 1563 aa12.44□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 MaddQ80U28 1577 aa12.44□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 NalcnQ8BXR5 1738 aa12.44□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Zscan21Q07231 555 aa12.43□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Slc24a1Q91WD8 1130 aa12.43□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Bcl2l12Q9D3J3 255 aa12.43□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Plekhg1F6S200 1446 aa12.43□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Sipa1l1Q8C0T5 1782 aa12.43□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Ift172Q6VH22 1749 aa12.42□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Stag3O70576 1240 aa12.42□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Atf7ipQ7TT18 1306 aa12.41□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Lrrc7Q80TE7 1490 aa12.41□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Q9D9H8 365 aa12.41□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Inpp5dQ9ES52 1191 aa12.41□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 KdrP35918 1367 aa12.41□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 HnrnpmQ9D0E1 729 aaKnown RBP12.4□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 C3P01027 1663 aa12.4□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 NinlQ6ZQ12 1394 aa12.4□□□□□ -0.42
Ccdc42-201ENSMUST00000063006 Atf3Q60765 181 aa12.39□□□□□ -0.43
Ccdc42-201ENSMUST00000063006 Zranb1Q7M760 708 aa12.39□□□□□ -0.43
Ccdc42-201ENSMUST00000063006 Egfem1Q8C088 590 aa12.39□□□□□ -0.43
Ccdc42-201ENSMUST00000063006 Atp1b4Q99ME6 356 aa12.39□□□□□ -0.43
Ccdc42-201ENSMUST00000063006 Ddx17Q501J6 650 aaKnown RBP12.38□□□□□ -0.43
Ccdc42-201ENSMUST00000063006 Ybx3Q9JKB3 361 aaKnown RBP12.38□□□□□ -0.43
Ccdc42-201ENSMUST00000063006 Rgs17Q9QZB0 210 aa12.38□□□□□ -0.43
Ccdc42-201ENSMUST00000063006 Rab3gap2Q8BMG7 1366 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms