RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 MpripP97434 1024 aa15.2■□□□□ 0.02
Sdf4-201ENSMUST00000050078 IbspQ61711 324 aa15.2■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Bicd2Q921C5 820 aa15.2■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Kif18aQ91WD7 886 aa15.19■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Mad1l1Q9WTX8 717 aaKnown RBP15.19■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Abcc5Q9R1X5 1436 aa15.19■□□□□ 0.02
Sdf4-201ENSMUST00000050078 BccipQ9CWI3 316 aa15.18■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Gprasp1Q5U4C1 1347 aa15.18■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Stk3Q9JI10 497 aa15.18■□□□□ 0.02
Sdf4-201ENSMUST00000050078 FosbP13346 338 aa15.18■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Chmp7Q8R1T1 451 aa15.18■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Tomm22Q9CPQ3 142 aa15.18■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Ubap1lG3UW59 384 aa15.17■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Usp48Q3V0C5 1052 aa15.17■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Q8C5K5 320 aa15.17■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Cabp2Q9JLK4 216 aa15.17■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Pcf11G3X9Z4 1553 aa15.17■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Sall3Q62255 1320 aa15.17■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Tpd52l1O54818 204 aa15.16■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Atxn3Q9CVD2 355 aa15.16■□□□□ 0.02
Sdf4-201ENSMUST00000050078 TchhA0A0B4J1F9 1599 aa15.16■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Fyb1O35601 819 aa15.15■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Babam1Q3UI43 333 aa15.15■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Rab11fip3Q8CHD8 1047 aa15.15■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Smc4Q8CG47 1286 aa15.15■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Sptbn5F6UCX4 1208 aa15.15■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Naip5Q9R016 1403 aa15.15■□□□□ 0.02
Sdf4-201ENSMUST00000050078 Ddx11Q6AXC6 880 aa15.14■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Rnf20Q5DTM8 973 aa15.14■□□□□ 0.01
Sdf4-201ENSMUST00000050078 1700010I14RikQ7TPG0 532 aa15.14■□□□□ 0.01
Sdf4-201ENSMUST00000050078 NexmifQ5DTT1 1515 aa15.14■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Mug1P28665 1476 aa15.14■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Ssh1Q76I79 1042 aa15.14■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Fbxo2Q80UW2 297 aa15.13■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Ncoa1P70365 1447 aa15.13■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Mphosph10Q810V0 681 aaKnown RBP15.13■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Cdk19Q8BWD8 501 aa15.13■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Zkscan2G3X952 960 aa15.13■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Mcm2P97310 904 aa15.13■□□□□ 0.01
Sdf4-201ENSMUST00000050078 TatQ8QZR1 454 aa15.13■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Pdcl3Q8BVF2 240 aa15.13■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Maco1Q7TQE6 664 aaKnown RBP15.12■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Erc2Q6PH08 957 aa15.12■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Camsap1A2AHC3 1581 aa15.12■□□□□ 0.01
Sdf4-201ENSMUST00000050078 BicraF8VPZ9 1578 aa15.12■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Tfip11Q9ERA6 838 aaKnown RBP15.11■□□□□ 0.01
Sdf4-201ENSMUST00000050078 PalmQ9Z0P4 383 aa15.11■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Ggnbp2Q5SV77 696 aa15.11■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Plb1Q3TTY0 1478 aa15.11■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Pknox2Q8BG99 474 aa15.11■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Fgd6Q69ZL1 1399 aa15.1■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Cplx2P84086 134 aa15.1■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Zkscan1Q8BGS3 561 aaKnown RBP15.1■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Ccdc141E9Q8Q6 1531 aa15.1■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Dnai2A2AC93 623 aa15.1■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Afap1Q80YS6 731 aa15.1■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Cplx1P63040 134 aa15.09■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Gsdma3Q5Y4Y6 464 aa15.09■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Smc5Q8CG46 1101 aaKnown RBP15.09■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Hnrnpul1Q8VDM6 859 aaKnown RBP15.09■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Fkbp4P30416 458 aa15.09■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Dixdc1Q80Y83 711 aa15.09■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Nphp1Q9QY53 687 aa15.09■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Wdr78E9PYY5 807 aa15.08■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Jakmip1Q8BVL9 626 aa15.08■□□□□ 0.01
Sdf4-201ENSMUST00000050078 Gnai2P08752 355 aaKnown RBP15.08■□□□□ 0
Sdf4-201ENSMUST00000050078 Tpm3P21107 285 aaKnown RBP15.08■□□□□ 0
Sdf4-201ENSMUST00000050078 Cdc37l1Q9CZP7 335 aa15.08■□□□□ 0
Sdf4-201ENSMUST00000050078 Ccdc47Q9D024 483 aaKnown RBP15.08■□□□□ 0
Sdf4-201ENSMUST00000050078 Cwc27Q3TKY6 469 aa15.08■□□□□ 0
Sdf4-201ENSMUST00000050078 Drc7Q6V3W6 876 aa15.08■□□□□ 0
Sdf4-201ENSMUST00000050078 Ints3Q7TPD0 1041 aaKnown RBP15.08■□□□□ 0
Sdf4-201ENSMUST00000050078 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.07■□□□□ 0
Sdf4-201ENSMUST00000050078 Gm10471E9Q1C7 252 aa15.07■□□□□ 0
Sdf4-201ENSMUST00000050078 Liat1Q810M6 228 aa15.07■□□□□ 0
Sdf4-201ENSMUST00000050078 Gm21969J3QJZ1 289 aa15.07■□□□□ 0
Sdf4-201ENSMUST00000050078 HypkQ9CR41 129 aa15.07■□□□□ 0
Sdf4-201ENSMUST00000050078 Gcc1Q9D4H2 778 aa15.07■□□□□ 0
Sdf4-201ENSMUST00000050078 BcanQ61361 883 aa15.07■□□□□ 0
Sdf4-201ENSMUST00000050078 CarsQ9ER72 831 aaKnown RBP15.06■□□□□ 0
Sdf4-201ENSMUST00000050078 3425401B19RikD3Z1D3 1412 aa15.06■□□□□ 0
Sdf4-201ENSMUST00000050078 Gm14025A2AP89 1413 aa15.05■□□□□ 0
Sdf4-201ENSMUST00000050078 Cchcr1Q8K2I2 770 aa15.05■□□□□ 0
Sdf4-201ENSMUST00000050078 Rprd2Q6NXI6 1469 aaKnown RBP15.05■□□□□ -0
Sdf4-201ENSMUST00000050078 Gabpb2P81069 414 aa15.05■□□□□ -0
Sdf4-201ENSMUST00000050078 Rec8Q8C5S7 591 aa15.05■□□□□ -0
Sdf4-201ENSMUST00000050078 PhaxQ9JJT9 385 aaKnown RBP15.05■□□□□ -0
Sdf4-201ENSMUST00000050078 Krt82Q99M74 516 aa15.04■□□□□ -0
Sdf4-201ENSMUST00000050078 Asxl1P59598 1514 aa15.04■□□□□ -0
Sdf4-201ENSMUST00000050078 Srgap3Q812A2 1099 aa15.04■□□□□ -0
Sdf4-201ENSMUST00000050078 Srek1Q8BZX4 494 aaKnown RBP15.04■□□□□ -0
Sdf4-201ENSMUST00000050078 Ccdc173A0JLY1 547 aa15.03■□□□□ -0
Sdf4-201ENSMUST00000050078 Fmnl2A2APV2 1086 aa15.03■□□□□ -0
Sdf4-201ENSMUST00000050078 Hook1Q8BIL5 728 aa15.02■□□□□ -0
Sdf4-201ENSMUST00000050078 Polr3aB2RXC6 1390 aa15.02■□□□□ -0
Sdf4-201ENSMUST00000050078 Rbm10Q99KG3 930 aaKnown RBP15.02■□□□□ -0
Sdf4-201ENSMUST00000050078 Q9D9S1 216 aa15.02■□□□□ -0
Sdf4-201ENSMUST00000050078 AnlnQ8K298 1121 aaKnown RBP15.02□□□□□ -0.01
Sdf4-201ENSMUST00000050078 Ttc21bQ0HA38 1315 aa15.02□□□□□ -0.01
Sdf4-201ENSMUST00000050078 Mrc2Q64449 1479 aa15.02□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms