RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Plekhh1Q80TI1 1356 aa14.77□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Triml2E9PW10 424 aa14.77□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Cavin4A2AMM0 362 aa14.77□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Cabp2Q9JLK4 216 aa14.77□□□□□ -0.05
Pcif1-201ENSMUST00000041643 HypkQ9CR41 129 aa14.77□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Rrbp1Q99PL5 1605 aaKnown RBP14.76□□□□□ -0.05
Pcif1-201ENSMUST00000041643 IbtkQ6ZPR6 1352 aaKnown RBP14.76□□□□□ -0.05
Pcif1-201ENSMUST00000041643 AppP12023 770 aa14.76□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Pank1Q8K4K6 548 aa14.76□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Bcl2l13P59017 434 aa14.75□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Zfp444Q3TDV8 331 aaKnown RBP14.75□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Cyb5rlB1AS42 316 aa14.75□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Lmo7E9PYF4 1699 aaKnown RBP14.74□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Spryd3E9Q9B3 442 aa14.74□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Nutm1Q8BHP2 1126 aa14.74□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Nolc1E9Q5C9 702 aaKnown RBP14.74□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Lmtk2Q3TYD6 1471 aa14.74□□□□□ -0.05
Pcif1-201ENSMUST00000041643 PalmQ9Z0P4 383 aa14.73□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Sv2bQ8BG39 683 aa14.73□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Adamts12Q811B3 1600 aa14.73□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Ipo9Q91YE6 1041 aa14.73□□□□□ -0.05
Pcif1-201ENSMUST00000041643 PnnO35691 725 aaKnown RBP14.73□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Casc1Q6TDU8 730 aa14.73□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Ddx54Q8K4L0 874 aaKnown RBP14.73□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Arhgef11Q68FM7 1552 aa14.73□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Smc4Q8CG47 1286 aa14.72□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Gm10563F6WIE4 79 aa14.72□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Znf710Q3U288 666 aa14.72□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Kdm3bQ6ZPY7 1562 aa14.71□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Tceal9Q9DD24 104 aa14.71□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Iffo2Q8R2V2 512 aa14.71□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Ccdc171E9Q1U1 1324 aa14.71□□□□□ -0.05
Pcif1-201ENSMUST00000041643 Ncoa1P70365 1447 aa14.71□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Sf3b2Q3UJB0 878 aaKnown RBP14.7□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Abca16E9PWJ7 1678 aa14.7□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Abcc2Q8VI47 1543 aa14.7□□□□□ -0.06
Pcif1-201ENSMUST00000041643 AampJ3QN89 436 aa14.7□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Gcc2Q8CHG3 1679 aa14.69□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Supt6hQ62383 1726 aaKnown RBP14.69□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Dusp27Q148W8 1138 aa14.68□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.68□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Ccdc9Q8VC31 543 aaKnown RBP14.68□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Eif2s2Q99L45 331 aaKnown RBP14.68□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Adgrl2Q8JZZ7 1487 aa14.68□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Smarce1O54941 411 aaKnown RBP14.67□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Gli2Q0VGT2 1544 aa14.67□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Cald1E9QA15 768 aaKnown RBP14.67□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Fchsd2Q3USJ8 740 aa14.67□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Cfdp1O88271 295 aaKnown RBP14.66□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Mphosph10Q810V0 681 aaKnown RBP14.66□□□□□ -0.06
Pcif1-201ENSMUST00000041643 PtmsQ9D0J8 101 aaKnown RBP14.66□□□□□ -0.06
Pcif1-201ENSMUST00000041643 TefQ9JLC6 301 aa14.66□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Plekhd1B2RPU2 505 aa14.66□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Cnnm1Q0GA42 951 aa14.65□□□□□ -0.06
Pcif1-201ENSMUST00000041643 Dennd4bQ3U1Y4 1499 aa14.65□□□□□ -0.06
Pcif1-201ENSMUST00000041643 TkfcQ8VC30 578 aa14.64□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Anapc15P60007 132 aa14.64□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Fkbp4P30416 458 aa14.64□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Smg7Q5RJH6 1138 aaKnown RBP14.64□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Cdc37l1Q9CZP7 335 aa14.64□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Fmn2Q9JL04 1578 aa14.64□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Speer4bQ9D9F7 267 aa14.64□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Adgrl3Q80TS3 1537 aa14.63□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Ppm1fQ8CGA0 452 aa14.63□□□□□ -0.07
Pcif1-201ENSMUST00000041643 RalgapbQ8BQZ4 1484 aa14.63□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Ppp1r15aP17564 657 aa14.63□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Chrna2Q91X60 512 aa14.63□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Talpid3E9PV87 1520 aa14.63□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Prkrip1Q9CWV6 186 aaKnown RBP14.63□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Znf518aB2RRF6 1478 aaKnown RBP14.63□□□□□ -0.07
Pcif1-201ENSMUST00000041643 ChgaP26339 463 aaKnown RBP14.62□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Idi2Q8BFZ6 227 aa14.62□□□□□ -0.07
Pcif1-201ENSMUST00000041643 BcanQ61361 883 aa14.62□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Lrrc9Q8CDN9 1456 aa14.62□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Pcmtd1P59913 357 aa14.62□□□□□ -0.07
Pcif1-201ENSMUST00000041643 GnpatP98192 678 aa14.62□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Neurod6P48986 337 aa14.61□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Q8C5K5 320 aa14.61□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Map3k4O08648 1597 aa14.61□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Ggnbp2Q5SV77 696 aa14.61□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Mast1Q9R1L5 1570 aa14.61□□□□□ -0.07
Pcif1-201ENSMUST00000041643 NexnQ7TPW1 607 aa14.61□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Gm21663A0A0G2JE01 267 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Gm7361D3Z6R1 267 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 5031410I06RikE9Q4E0 267 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Gm1979E9QAN3 267 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Gm5862K7N5V5 267 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Gm10220K7N660 267 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Kcnh5Q920E3 988 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 CatipB9EKE5 520 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 CgnP59242 1191 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Gm21680A0A0G2JGR8 267 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 ZgpatQ8VDM1 511 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Camsap2Q8C1B1 1461 aa14.6□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Abcc6Q9R1S7 1498 aa14.59□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Hmox1P14901 289 aa14.59□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Map4k4P97820 1233 aaKnown RBP14.59□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Ptch1Q61115 1434 aa14.59□□□□□ -0.07
Pcif1-201ENSMUST00000041643 4930572O03RikQ8C5Y0 211 aa14.59□□□□□ -0.07
Pcif1-201ENSMUST00000041643 TmpoQ61033 693 aaKnown RBP14.58□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 194.1 ms