RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Hnrnpul1Q8VDM6 859 aaKnown RBP27.8■■■□□ 2.04
Sh3rf1-201ENSMUST00000034060 Ncoa2Q61026 1462 aa27.79■■■□□ 2.04
Sh3rf1-201ENSMUST00000034060 Nsd2Q8BVE8 1365 aa27.79■■■□□ 2.04
Sh3rf1-201ENSMUST00000034060 Vps53Q8CCB4 832 aa27.78■■■□□ 2.04
Sh3rf1-201ENSMUST00000034060 Noc3lQ8VI84 807 aaKnown RBP27.78■■■□□ 2.04
Sh3rf1-201ENSMUST00000034060 Rbm10Q99KG3 930 aaKnown RBP27.77■■■□□ 2.04
Sh3rf1-201ENSMUST00000034060 HmmrQ00547 794 aaKnown RBP27.77■■■□□ 2.04
Sh3rf1-201ENSMUST00000034060 Fam193aQ8CGI1 1231 aaKnown RBP27.76■■■□□ 2.04
Sh3rf1-201ENSMUST00000034060 Arid4aF8VPQ2 1261 aaKnown RBP27.76■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Tmco3Q8BH01 678 aa27.76■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Trim29Q8R2Q0 587 aa27.75■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Tubb6Q922F4 447 aa27.75■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 ErbinQ80TH2 1402 aa27.75■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Cabp4Q8VHC5 271 aa27.75■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Gcc1Q9D4H2 778 aa27.75■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Rab3gap2Q8BMG7 1366 aa27.74■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Slc4a2P13808 1237 aaKnown RBP27.74■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Samd1D3YXK1 519 aa27.73■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Sptbn5F6UCX4 1208 aa27.73■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Gsdma3Q5Y4Y6 464 aa27.72■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Znf771Q8BJ90 317 aa27.72■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Gps2Q921N8 327 aa27.71■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Zfp444Q3TDV8 331 aaKnown RBP27.7■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Usp48Q3V0C5 1052 aa27.7■■■□□ 2.03
Sh3rf1-201ENSMUST00000034060 Fam43aQ8BUP8 424 aa27.7■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Ccdc43Q9CR29 222 aaKnown RBP27.7■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Cttnbp2B9EJA2 1648 aa27.69■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Fam184aE9PW83 1143 aa27.69■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Cc2d2bA0A286YDU8 1405 aa27.69■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Smc2Q8CG48 1191 aaKnown RBP27.68■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Olfml1Q8BSH2 233 aa27.67■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Cep112Q5PR68 954 aa27.67■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Nat10Q8K224 1024 aaKnown RBP27.66■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Shq1Q7TMX5 569 aa27.66■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Polr1aO35134 1717 aaKnown RBP27.66■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Sv2bQ8BG39 683 aa27.65■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Ppp2r1aQ76MZ3 589 aa27.64■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Plekhg5Q66T02 1073 aa27.64■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 March6Q6ZQ89 909 aa27.64■■■□□ 2.02
Sh3rf1-201ENSMUST00000034060 Ssh1Q76I79 1042 aa27.64■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Q8C5K5 320 aa27.63■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Trim55G3X8Y1 545 aa27.63■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Chmp7Q8R1T1 451 aa27.63■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Me1P06801 572 aa27.62■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Gsto1O09131 240 aa27.62■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 CrcpO35427 148 aa27.62■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 NexnQ7TPW1 607 aa27.62■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 LrpprcQ6PB66 1392 aaKnown RBP27.62■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Pip4k2aO70172 405 aa27.61■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Mink1Q9JM52 1308 aa27.61■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Med4Q9CQA5 270 aa27.61■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Cecr2E9Q2Z1 1453 aa27.61■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 FanciQ8K368 1330 aa27.61■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Cavin4A2AMM0 362 aa27.61■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Ift140E9PY46 1464 aa27.6■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 A0A0U1RNP2 1173 aa27.6■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Dnaaf4Q8R368 420 aa27.6■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Q8BT18 775 aa27.6■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 UvssaQ9D479 717 aa27.6■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Phldb1Q6PDH0 1371 aaKnown RBP27.6■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Q9D9S1 216 aa27.6■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Efcab5A0JP43 1406 aa27.6■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Phldb2Q8K1N2 1249 aa27.59■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Nol12Q8BG17 217 aa27.59■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Podxl2Q8CAE9 603 aa27.59■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Lrrcc1Q69ZB0 1026 aa27.59■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Neurod6P48986 337 aa27.58■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 TnmdQ9EP64 317 aa27.58■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Paxip1Q6NZQ4 1056 aa27.58■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Ccp110Q7TSH4 1004 aa27.58■■■□□ 2.01
Sh3rf1-201ENSMUST00000034060 Ncapd3Q6ZQK0 1506 aa27.57■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Otud6bQ8K2H2 294 aa27.57■■■□□ 2
Sh3rf1-201ENSMUST00000034060 NefhP19246 1090 aa27.56■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Bag1Q60739 355 aa27.56■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Fmnl2A2APV2 1086 aa27.56■■■□□ 2
Sh3rf1-201ENSMUST00000034060 CastP51125 788 aa27.56■■■□□ 2
Sh3rf1-201ENSMUST00000034060 NcapgE9PWG6 1004 aa27.55■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Nectin2P32507 530 aa27.55■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Ccdc102aQ3TMW1 549 aa27.55■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Smarca4Q3TKT4 1613 aaKnown RBP27.54■■■□□ 2
Sh3rf1-201ENSMUST00000034060 FosbP13346 338 aa27.54■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Kiaa0753Q6A000 959 aa27.54■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Cfdp1O88271 295 aaKnown RBP27.54■■■□□ 2
Sh3rf1-201ENSMUST00000034060 OptnQ8K3K8 584 aa27.54■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Nap1l1P28656 391 aaKnown RBP27.53■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Ggt6Q6PDE7 497 aa27.52■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Stk38Q91VJ4 465 aa27.52■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Q7TT23 1179 aa27.52■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Myom3A2ABU4 1439 aa27.52■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Pmfbp1Q9WVQ0 1022 aa27.52■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Krt85Q9Z2T6 507 aa27.52■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Cavin1O54724 392 aa27.52■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Erlin2Q8BFZ9 340 aa27.51■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Nutm1Q8BHP2 1126 aa27.51■■■□□ 2
Sh3rf1-201ENSMUST00000034060 Dhx16G3X8X0 1044 aaKnown RBP27.51■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Odf2lQ9D478 642 aa27.51■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 SelenooQ9DBC0 667 aa27.51■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Nphp1Q9QY53 687 aa27.51■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Kif18aQ91WD7 886 aa27.51■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Gnai2P08752 355 aaKnown RBP27.51■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms