RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Gli2Q0VGT2 1544 aa13.86□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Uggt2E9Q4X2 1504 aa13.86□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Prex1Q69ZK0 1650 aa13.86□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Golga2Q921M4 999 aa13.85□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Gm16486A0A1D5RMD1 1434 aa13.85□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Kiaa0556Q8C753 1610 aa13.85□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 4930567H17RikQ3V0K5 233 aa13.85□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Zranb1Q7M760 708 aa13.85□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Tspyl2Q7TQI8 677 aa13.85□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Tex14Q7M6U3 1450 aa13.85□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Stk26Q99JT2 416 aa13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Dip2cE9PWR4 1557 aa13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 DaxxO35613 739 aa13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 CanxP35564 591 aaKnown RBP13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Chmp5Q9D7S9 219 aa13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Iqgap3F8VQ29 1632 aa13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Cdc42bpgQ80UW5 1551 aa13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Puf60Q3UEB3 564 aaKnown RBP13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Atxn3Q9CVD2 355 aa13.84□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 RereQ80TZ9 1558 aa13.83□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Pank1Q8K4K6 548 aa13.82□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Rrp9Q91WM3 475 aaKnown RBP13.82□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 AatkQ80YE4 1365 aa13.81□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Iqcf3Q9D498 203 aa13.81□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Abca8aQ8K442 1620 aa13.8□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Ppp1r18Q8BQ30 594 aa13.8□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 AdgbG3UZ78 1657 aa13.8□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Yeats2Q3TUF7 1407 aa13.79□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Trim30dE9PWL0 497 aa13.79□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Cul9Q80TT8 1865 aa13.79□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Apaf1O88879 1249 aa13.79□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Zfp91Q62511 572 aa13.78□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Senp3Q9EP97 568 aaKnown RBP13.78□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Plekhh1Q80TI1 1356 aa13.78□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Sbno1Q689Z5 1390 aa13.78□□□□□ -0.2
Ptcd1-201ENSMUST00000031628 Ttc37F8VPK0 1563 aa13.77□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 EspnQ9ET47 871 aa13.77□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Myo3aQ8K3H5 1613 aa13.76□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Adgrb3Q80ZF8 1522 aa13.76□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Usp19Q3UJD6 1360 aa13.76□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Tecpr2Q3UH45 1423 aa13.76□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Sart3Q9JLI8 962 aaKnown RBP13.75□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Rims1Q99NE5 1463 aa13.75□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Trpm1Q2TV84 1622 aa13.75□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Ehbp1l1Q99MS7 1716 aa13.75□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Akap12Q9WTQ5 1684 aa13.74□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Synj2Q9D2G5 1434 aa13.74□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Kdm2bQ6P1G2 1309 aa13.74□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 P2rx7Q9Z1M0 595 aa13.74□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Cep152A2AUM9 1736 aaKnown RBP13.74□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Kiaa1107Q80TK0 1369 aa13.74□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 U2af1Q9D883 239 aaKnown RBP13.74□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Arid4bA2CG63 1314 aaKnown RBP13.73□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Exosc9Q9JHI7 438 aaKnown RBP13.73□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Mbd3Q9Z2D8 285 aaKnown RBP13.72□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Efcab6Q6P1E8 1516 aa13.72□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Prdm2A2A7B5 1709 aaKnown RBP13.72□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Ino80Q6ZPV2 1559 aa13.72□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Cfap65Q3V0B4 1847 aa13.72□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Ksr2Q3UVC0 959 aa13.72□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Mink1Q9JM52 1308 aa13.71□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Pola1P33609 1465 aa13.71□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 AU022751B1B0V2 589 aa13.71□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 IqubQ8CDK3 788 aa13.71□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 GsdmaQ9EST1 446 aa13.71□□□□□ -0.21
Ptcd1-201ENSMUST00000031628 Uspl1Q3ULM6 1089 aa13.71□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Eif2s2Q99L45 331 aaKnown RBP13.71□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 NudcO35685 332 aaKnown RBP13.7□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Tshz2Q68FE9 1030 aa13.7□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Talpid3E9PV87 1520 aa13.7□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Atf7ipQ7TT18 1306 aa13.7□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Hecw2Q6I6G8 1578 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Kdm5aQ3UXZ9 1690 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Myom2Q14BI5 1463 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 AU015836B2RUM3 263 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Tsen2Q6P7W5 460 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Cluap1Q8R3P7 413 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Cdk5rap2Q8K389 1822 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Znf330Q922H9 316 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Adamts7Q68SA9 1657 aa13.69□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Nkx1-2P42580 305 aa13.68□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Stard8Q8K031 1019 aa13.68□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Ak7Q9D2H2 614 aa13.68□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 TnikP83510 1323 aa13.68□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Smc5Q8CG46 1101 aaKnown RBP13.68□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Knl1Q66JQ7 1612 aa13.68□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Hsp90ab1P11499 724 aaKnown RBP13.67□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Rsph4aQ8BYM7 716 aa13.67□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Ppp1r3fQ9JIG4 799 aa13.67□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Dnai1Q8C0M8 701 aa13.67□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Nphp4P59240 1425 aa13.67□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Ralbp1Q62172 648 aa13.67□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Shq1Q7TMX5 569 aa13.67□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Rlbp1Q9Z275 317 aa13.66□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Skint5A7XUY5 1461 aa13.65□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Mroh1E0CZ22 1640 aa13.65□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Itsn2Q9Z0R6 1659 aa13.65□□□□□ -0.22
Ptcd1-201ENSMUST00000031628 Cald1E9QA15 768 aaKnown RBP13.65□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Duxf3A0A0N4SV92 674 aa13.64□□□□□ -0.23
Ptcd1-201ENSMUST00000031628 Afap1Q80YS6 731 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms