RNA–Protein interactions for RNA: ENSMUST00000028003.8

Lmx1a-201, Transcript of LIM homeobox transcription factor 1-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lmx1a, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1a-201ENSMUST00000028003 Rrp12Q6P5B0 1295 aaKnown RBP11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Fam43aQ8BUP8 424 aa11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Rprd2Q6NXI6 1469 aaKnown RBP11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 PalldQ9ET54 1408 aa11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Zc3h13E9Q784 1729 aaKnown RBP11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Ppm1gQ61074 542 aa11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Paxip1Q6NZQ4 1056 aa11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Rapgef3Q8VCC8 918 aa11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Prdm2A2A7B5 1709 aaKnown RBP11.13□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Kif13aQ9EQW7 1749 aa11.13□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Trim26Q99PN3 545 aa11.12□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Cd109Q8R422 1442 aa11.12□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Nkx1-2P42580 305 aa11.12□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Tnnt2P50752 301 aa11.12□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Exoc6Q8R313 802 aa11.12□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Naip7Q9JIB3 1402 aa11.12□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 B4galnt3Q6L8S8 986 aa11.11□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 PplQ9R269 1755 aa11.11□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Eif2ak4Q9QZ05 1648 aa11.11□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Kif20aP97329 887 aa11.11□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Kif21bQ9QXL1 1668 aa11.1□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Setd1aE9PYH6 1716 aa11.1□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 DroshaQ5HZJ0 1373 aaKnown RBP11.1□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Htatsf1Q8BGC0 757 aa11.1□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Abca8aQ8K442 1620 aa11.09□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Mroh1E0CZ22 1640 aa11.09□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 4933402E13RikQ9D4D2 429 aa11.09□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Ttll13A4Q9F6 804 aa11.08□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Prdm10Q3UTQ7 1184 aa11.08□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Tubgcp6G5E8P0 1769 aa11.08□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Tex2Q6ZPJ0 1128 aaKnown RBP11.08□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Pik3c2gO70167 1506 aa11.08□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Ppip5k1A2ARP1 1436 aa11.07□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Ttll5Q8CHB8 1328 aa11.07□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 L3mbtl2P59178 703 aa11.07□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 DekQ7TNV0 380 aaKnown RBP11.07□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Atp7aQ64430 1491 aa11.06□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Pip4k2bQ80XI4 416 aa11.06□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Ehbp1l1Q99MS7 1716 aa11.06□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Gm13695A2AK44 830 aa11.06□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Trim44Q9QXA7 346 aa11.06□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Slit3Q9WVB4 1523 aa11.05□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Myo3aQ8K3H5 1613 aa11.05□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Dbr1Q923B1 550 aa11.05□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Thsd7aQ69ZU6 1645 aa11.05□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Pik3r4Q8VD65 1358 aa11.04□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Edc4Q3UJB9 1406 aaKnown RBP11.04□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 ErbinQ80TH2 1402 aa11.04□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Nom1Q3UFM5 854 aaKnown RBP11.04□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 NudcO35685 332 aaKnown RBP11.04□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 EspnQ9ET47 871 aa11.04□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Arap3Q8R5G7 1538 aa11.03□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Arhgef28P97433 1693 aa11.03□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 PogkQ80TC5 607 aa11.03□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Ube2q2Q8K2Z8 378 aa11.03□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Arid4bA2CG63 1314 aaKnown RBP11.03□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 DnmbpQ6TXD4 1580 aa11.03□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Pdlim2Q8R1G6 349 aa11.02□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Cdk13Q69ZA1 1511 aaKnown RBP11.02□□□□□ -0.64
Lmx1a-201ENSMUST00000028003 Prrc2bQ7TPM1 1486 aaKnown RBP11.02□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Plxnc1Q9QZC2 1574 aa11.02□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Tpm2P58774 284 aa11.02□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Unc13bQ9Z1N9 1602 aa11.01□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Zfp644E9QA22 1323 aa11.01□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Hsp90ab1P11499 724 aaKnown RBP11.01□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Txndc2Q6P902 515 aa11.01□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Dhx9O70133 1380 aaKnown RBP11.01□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Prkrip1Q9CWV6 186 aaKnown RBP11.01□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Fbxo2Q80UW2 297 aa11□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Irf5P56477 497 aa11□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Tshz2Q68FE9 1030 aa11□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Eif2s2Q99L45 331 aaKnown RBP10.99□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Col18a1P39061 1774 aa10.99□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Trim30dE9PWL0 497 aa10.99□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Trak1Q6PD31 939 aa10.99□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Dhx30Q99PU8 1217 aaKnown RBP10.99□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Ankrd36D3Z4K0 1415 aa10.99□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 MaddQ80U28 1577 aa10.98□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 PnisrA2AJT4 805 aaKnown RBP10.98□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Ddrgk1Q80WW9 315 aa10.98□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Psme1P97371 249 aa10.98□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 AatkQ80YE4 1365 aa10.98□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Mphosph9A6H5Y1 991 aa10.97□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Chmp5Q9D7S9 219 aa10.97□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Pdia4P08003 638 aaKnown RBP10.97□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Rock1P70335 1354 aa10.97□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Mbd5B1AYB6 1498 aa10.96□□□□□ -0.65
Lmx1a-201ENSMUST00000028003 Lmod3E9QA62 571 aa10.96□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Gm6268A2A3U9 297 aa10.95□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Myom1Q62234 1667 aaKnown RBP10.95□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Znf326O88291 580 aa10.94□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Hspa1lP16627 641 aa10.94□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Clcn1Q64347 994 aa10.94□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Tns3Q5SSZ5 1440 aa10.93□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Dot1lQ6XZL8 1540 aa10.93□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Dapk1Q80YE7 1442 aa10.93□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Rims1Q99NE5 1463 aa10.93□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Nwd1A6H603 1563 aa10.92□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 VgfQ0VGU4 617 aa10.92□□□□□ -0.66
Lmx1a-201ENSMUST00000028003 Ripply1Q2WG77 201 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms