RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Speer4f1Q9D5Q6 258 aa11.4□□□□□ -0.58
Ctc1-201ENSMUST00000021278 Rrp7aQ9D1C9 280 aaKnown RBP11.39□□□□□ -0.59
Ctc1-201ENSMUST00000021278 CalrP14211 416 aaKnown RBP11.39□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Ralbp1Q62172 648 aa11.39□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Fam177a1Q8BR63 207 aa11.39□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Kdm6bQ5NCY0 1641 aa11.39□□□□□ -0.59
Ctc1-201ENSMUST00000021278 OvosQ3UU35 1456 aa11.39□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Rabep1O35551 862 aa11.38□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Gzf1Q4VBD9 706 aa11.38□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Isy1Q69ZQ2 285 aaKnown RBP11.38□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Ptch1Q61115 1434 aa11.38□□□□□ -0.59
Ctc1-201ENSMUST00000021278 U2af2P26369 475 aaKnown RBP11.38□□□□□ -0.59
Ctc1-201ENSMUST00000021278 PdiltQ9DAN1 588 aa11.37□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Synj2Q9D2G5 1434 aa11.37□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Gcc2Q8CHG3 1679 aa11.37□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Wdr78E9PYY5 807 aa11.37□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Cavin1O54724 392 aa11.37□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Ppp1r9bQ6R891 817 aaKnown RBP11.37□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Map3k5O35099 1380 aa11.36□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Cul7Q8VE73 1689 aa11.36□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Yeats2Q3TUF7 1407 aa11.36□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Sptbn5F6UCX4 1208 aa11.36□□□□□ -0.59
Ctc1-201ENSMUST00000021278 FanciQ8K368 1330 aa11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Pcf11G3X9Z4 1553 aa11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Bms1Q6PGF5 1284 aaKnown RBP11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 1700017N19RikA0A087WPJ1 469 aa11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Pdcl2Q78Y63 240 aa11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Pank2Q3U4S0 443 aa11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 U2surpQ6NV83 1029 aaKnown RBP11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Sass6Q80UK7 654 aa11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 CrbnQ8C7D2 445 aa11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Trappc8E9PWG2 1437 aa11.35□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Zfp251Q6PCX8 632 aa11.34□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Dixdc1Q80Y83 711 aa11.34□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Abca8bQ8K440 1620 aa11.34□□□□□ -0.59
Ctc1-201ENSMUST00000021278 NpatQ8BMA5 1420 aa11.34□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Zscan21Q07231 555 aa11.34□□□□□ -0.59
Ctc1-201ENSMUST00000021278 Nbr1P97432 988 aa11.33□□□□□ -0.6
Ctc1-201ENSMUST00000021278 IqubQ8CDK3 788 aa11.33□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Utp3Q9JI13 469 aaKnown RBP11.33□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Erbb4Q61527 1308 aa11.33□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Kif3bQ61771 747 aa11.33□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Camsap2Q8C1B1 1461 aa11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Os9Q8K2C7 672 aa11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Ssr1Q9CY50 286 aaKnown RBP11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Fez2Q6TYB5 348 aa11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Zmynd15Q8C0R7 736 aa11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Mical1Q8VDP3 1048 aa11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Gripap1Q8VD04 806 aa11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Dcaf11Q91VU6 549 aa11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Zbtb12Q9Z150 459 aa11.32□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Dydc1Q9D9T0 175 aa11.31□□□□□ -0.6
Ctc1-201ENSMUST00000021278 SetQ9EQU5 289 aaKnown RBP11.31□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Ccnb3Q810T2 1396 aa11.31□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Kcng1A2BDX4 514 aa11.31□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Cwc15Q9JHS9 229 aaKnown RBP11.31□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Nap1l1P28656 391 aaKnown RBP11.31□□□□□ -0.6
Ctc1-201ENSMUST00000021278 CastP51125 788 aa11.31□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Chaf1aQ9QWF0 911 aa11.31□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Stk11ipQ3TAA7 1072 aa11.3□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Olfml1Q8BSH2 233 aa11.3□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Rgl3Q3UYI5 709 aa11.29□□□□□ -0.6
Ctc1-201ENSMUST00000021278 NexmifQ5DTT1 1515 aa11.29□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Mkrn3Q60764 544 aa11.29□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Tmco5bQ80X59 307 aa11.29□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Pank3Q8R2W9 370 aa11.29□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Grpel1Q99LP6 217 aa11.29□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Pes1Q9EQ61 584 aaKnown RBP11.29□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Dnajc2P54103 621 aaKnown RBP11.29□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Slc7a3P70423 618 aa11.28□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Pwp2Q8BU03 919 aaKnown RBP11.28□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Brpf1B2RRD7 1212 aa11.28□□□□□ -0.6
Ctc1-201ENSMUST00000021278 PtprmP28828 1452 aa11.28□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Mctp2Q5RJH2 878 aa11.28□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Rbm27Q5SFM8 1060 aaKnown RBP11.28□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Hdgfl1Q2VPR5 283 aa11.27□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Tmx1Q8VBT0 278 aa11.27□□□□□ -0.6
Ctc1-201ENSMUST00000021278 Casq1O09165 405 aa11.27□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Arglu1Q3UL36 271 aaKnown RBP11.27□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Iqca1Q9CUL5 857 aa11.27□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Rcan3Q9JKK0 239 aa11.27□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Atp10aO54827 1508 aa11.27□□□□□ -0.61
Ctc1-201ENSMUST00000021278 PnisrA2AJT4 805 aaKnown RBP11.26□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Serpinb6bO08804 377 aa11.26□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Rassf4Q8CB96 322 aa11.26□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Ercc6l2Q9JIM3 1537 aa11.26□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Syce3B5KM66 88 aa11.26□□□□□ -0.61
Ctc1-201ENSMUST00000021278 ErmnQ5EBJ4 281 aa11.26□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Kif4P33174 1231 aa11.26□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Igsf3Q6ZQA6 1194 aa11.26□□□□□ -0.61
Ctc1-201ENSMUST00000021278 KnstrnQ9D9Z1 312 aaKnown RBP11.25□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Hecw2Q6I6G8 1578 aa11.25□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Naip1Q9QWK5 1403 aa11.25□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Cfap65Q3V0B4 1847 aa11.25□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Atp2b3Q0VF55 1220 aa11.25□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Q7TT23 1179 aa11.25□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Atp2b1G5E829 1220 aa11.24□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Srpk2O54781 681 aaKnown RBP11.24□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Zfp444Q3TDV8 331 aaKnown RBP11.24□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Grwd1Q810D6 446 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms