RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Ccdc60Q8C4J0 545 aa13.04□□□□□ -0.32
Clip3-201ENSMUST00000014065 Adamts13Q769J6 1426 aa13.04□□□□□ -0.32
Clip3-201ENSMUST00000014065 AI481877A2ALV5 1481 aa13.04□□□□□ -0.32
Clip3-201ENSMUST00000014065 Setd1aE9PYH6 1716 aa13.03□□□□□ -0.32
Clip3-201ENSMUST00000014065 Pdcd11Q6NS46 1862 aaKnown RBP13.03□□□□□ -0.32
Clip3-201ENSMUST00000014065 Dusp27Q148W8 1138 aa13.03□□□□□ -0.32
Clip3-201ENSMUST00000014065 Aplp1Q03157 653 aa13.02□□□□□ -0.32
Clip3-201ENSMUST00000014065 Taok2Q6ZQ29 1240 aa13.02□□□□□ -0.32
Clip3-201ENSMUST00000014065 Tulp4Q9JIL5 1547 aa13.02□□□□□ -0.33
Clip3-201ENSMUST00000014065 SlkO54988 1233 aa13.02□□□□□ -0.33
Clip3-201ENSMUST00000014065 Map7O88735 730 aa13.02□□□□□ -0.33
Clip3-201ENSMUST00000014065 Rtn4Q99P72 1162 aaKnown RBP13.02□□□□□ -0.33
Clip3-201ENSMUST00000014065 Pdcl3Q8BVF2 240 aa13.01□□□□□ -0.33
Clip3-201ENSMUST00000014065 Catsper2A2ARP9 588 aa13.01□□□□□ -0.33
Clip3-201ENSMUST00000014065 Ssh1Q76I79 1042 aa13.01□□□□□ -0.33
Clip3-201ENSMUST00000014065 Stard8Q8K031 1019 aa13.01□□□□□ -0.33
Clip3-201ENSMUST00000014065 Lemd3Q9WU40 921 aa13.01□□□□□ -0.33
Clip3-201ENSMUST00000014065 Plin1Q8CGN5 517 aa13.01□□□□□ -0.33
Clip3-201ENSMUST00000014065 Abcc6Q9R1S7 1498 aa13.01□□□□□ -0.33
Clip3-201ENSMUST00000014065 Kiaa1210E9Q0C6 1637 aa13□□□□□ -0.33
Clip3-201ENSMUST00000014065 Cald1E9QA15 768 aaKnown RBP13□□□□□ -0.33
Clip3-201ENSMUST00000014065 Cog6Q8R3I3 657 aa13□□□□□ -0.33
Clip3-201ENSMUST00000014065 Ttc21bQ0HA38 1315 aa13□□□□□ -0.33
Clip3-201ENSMUST00000014065 Map4k4P97820 1233 aaKnown RBP13□□□□□ -0.33
Clip3-201ENSMUST00000014065 P2rx7Q9Z1M0 595 aa13□□□□□ -0.33
Clip3-201ENSMUST00000014065 Trim44Q9QXA7 346 aa12.99□□□□□ -0.33
Clip3-201ENSMUST00000014065 Gm14025A2AP89 1413 aa12.99□□□□□ -0.33
Clip3-201ENSMUST00000014065 AU019823E9PUQ3 292 aa12.99□□□□□ -0.33
Clip3-201ENSMUST00000014065 Ppip5k1A2ARP1 1436 aa12.99□□□□□ -0.33
Clip3-201ENSMUST00000014065 Tubgcp6G5E8P0 1769 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Kif18aQ91WD7 886 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Col17a1Q07563 1470 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Rnf17Q99MV7 1640 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Chd1P40201 1711 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Atl3Q91YH5 541 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Gm32742A0A1B0GT42 1604 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Fgd6Q69ZL1 1399 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Tbc1d32Q3URV1 1296 aa12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Maco1Q7TQE6 664 aaKnown RBP12.98□□□□□ -0.33
Clip3-201ENSMUST00000014065 Stk11ipQ3TAA7 1072 aa12.97□□□□□ -0.33
Clip3-201ENSMUST00000014065 Tmc1Q8R4P5 757 aa12.97□□□□□ -0.33
Clip3-201ENSMUST00000014065 Mast1Q9R1L5 1570 aa12.97□□□□□ -0.33
Clip3-201ENSMUST00000014065 Mcm4P49717 862 aa12.96□□□□□ -0.33
Clip3-201ENSMUST00000014065 Rbm25B2RY56 838 aaKnown RBP12.96□□□□□ -0.34
Clip3-201ENSMUST00000014065 Paxip1Q6NZQ4 1056 aa12.96□□□□□ -0.34
Clip3-201ENSMUST00000014065 Pdlim2Q8R1G6 349 aa12.96□□□□□ -0.34
Clip3-201ENSMUST00000014065 KnstrnQ9D9Z1 312 aaKnown RBP12.96□□□□□ -0.34
Clip3-201ENSMUST00000014065 G3bp1P97855 465 aaKnown RBP12.95□□□□□ -0.34
Clip3-201ENSMUST00000014065 NhsB1AV60 1647 aa12.95□□□□□ -0.34
Clip3-201ENSMUST00000014065 Il4rP16382 810 aa12.95□□□□□ -0.34
Clip3-201ENSMUST00000014065 1700019A02RikA0A087WPV9 146 aa12.94□□□□□ -0.34
Clip3-201ENSMUST00000014065 Neurl4Q5NCX5 1563 aa12.94□□□□□ -0.34
Clip3-201ENSMUST00000014065 Terf2O35144 541 aa12.94□□□□□ -0.34
Clip3-201ENSMUST00000014065 U2surpQ6NV83 1029 aaKnown RBP12.94□□□□□ -0.34
Clip3-201ENSMUST00000014065 Hecw1Q8K4P8 1604 aa12.93□□□□□ -0.34
Clip3-201ENSMUST00000014065 Kcnn1Q9EQR3 537 aa12.93□□□□□ -0.34
Clip3-201ENSMUST00000014065 Tfip11Q9ERA6 838 aaKnown RBP12.93□□□□□ -0.34
Clip3-201ENSMUST00000014065 Atp10dQ8K2X1 1416 aa12.93□□□□□ -0.34
Clip3-201ENSMUST00000014065 Birc3O08863 600 aa12.93□□□□□ -0.34
Clip3-201ENSMUST00000014065 Znf521Q6KAS7 1311 aa12.93□□□□□ -0.34
Clip3-201ENSMUST00000014065 IbtkQ6ZPR6 1352 aaKnown RBP12.93□□□□□ -0.34
Clip3-201ENSMUST00000014065 SkilQ60665 675 aa12.92□□□□□ -0.34
Clip3-201ENSMUST00000014065 Ccdc146E9Q9F7 977 aa12.92□□□□□ -0.34
Clip3-201ENSMUST00000014065 Nsfl1cQ9CZ44 370 aaKnown RBP12.92□□□□□ -0.34
Clip3-201ENSMUST00000014065 Phlpp2Q8BXA7 1320 aa12.92□□□□□ -0.34
Clip3-201ENSMUST00000014065 Zmym3Q9JLM4 1370 aa12.92□□□□□ -0.34
Clip3-201ENSMUST00000014065 Clasp1Q80TV8 1535 aaKnown RBP12.92□□□□□ -0.34
Clip3-201ENSMUST00000014065 Cep170Q6A065 1588 aa12.91□□□□□ -0.34
Clip3-201ENSMUST00000014065 Znf316Q6PGE4 1016 aa12.91□□□□□ -0.34
Clip3-201ENSMUST00000014065 Phf14Q9D4H9 881 aa12.91□□□□□ -0.34
Clip3-201ENSMUST00000014065 CenpjQ569L8 1344 aa12.91□□□□□ -0.34
Clip3-201ENSMUST00000014065 Gtf2a1Q99PM3 378 aa12.91□□□□□ -0.34
Clip3-201ENSMUST00000014065 Antxr1Q9CZ52 562 aa12.91□□□□□ -0.34
Clip3-201ENSMUST00000014065 Usp54Q8BL06 1588 aaKnown RBP12.9□□□□□ -0.34
Clip3-201ENSMUST00000014065 Nek4Q9Z1J2 792 aa12.9□□□□□ -0.34
Clip3-201ENSMUST00000014065 Rsph3aQ3UFY4 516 aa12.89□□□□□ -0.35
Clip3-201ENSMUST00000014065 Kdm5aQ3UXZ9 1690 aa12.89□□□□□ -0.35
Clip3-201ENSMUST00000014065 CastP51125 788 aa12.89□□□□□ -0.35
Clip3-201ENSMUST00000014065 Dmrtc1Q9D9R7 182 aa12.89□□□□□ -0.35
Clip3-201ENSMUST00000014065 Erich6bQ9D4S6 220 aa12.88□□□□□ -0.35
Clip3-201ENSMUST00000014065 AatkQ80YE4 1365 aa12.88□□□□□ -0.35
Clip3-201ENSMUST00000014065 Kif1bQ60575 1816 aaKnown RBP12.88□□□□□ -0.35
Clip3-201ENSMUST00000014065 PtmaP26350 111 aa12.88□□□□□ -0.35
Clip3-201ENSMUST00000014065 Shq1Q7TMX5 569 aa12.88□□□□□ -0.35
Clip3-201ENSMUST00000014065 Fam135bQ9DAI6 1403 aa12.88□□□□□ -0.35
Clip3-201ENSMUST00000014065 Abca8bQ8K440 1620 aa12.87□□□□□ -0.35
Clip3-201ENSMUST00000014065 Cavin4A2AMM0 362 aa12.87□□□□□ -0.35
Clip3-201ENSMUST00000014065 4933402E13RikQ9D4D2 429 aa12.87□□□□□ -0.35
Clip3-201ENSMUST00000014065 Myo3aQ8K3H5 1613 aa12.87□□□□□ -0.35
Clip3-201ENSMUST00000014065 Pibf1E9Q6K3 756 aa12.87□□□□□ -0.35
Clip3-201ENSMUST00000014065 Q4VA45 678 aa12.87□□□□□ -0.35
Clip3-201ENSMUST00000014065 Chmp4cQ9D7F7 232 aa12.87□□□□□ -0.35
Clip3-201ENSMUST00000014065 Pola1P33609 1465 aa12.86□□□□□ -0.35
Clip3-201ENSMUST00000014065 Cfap74Q3UY96 1578 aa12.86□□□□□ -0.35
Clip3-201ENSMUST00000014065 Znf608Q56A10 1511 aa12.86□□□□□ -0.35
Clip3-201ENSMUST00000014065 AampJ3QN89 436 aa12.86□□□□□ -0.35
Clip3-201ENSMUST00000014065 Cdc42bpbQ7TT50 1713 aa12.86□□□□□ -0.35
Clip3-201ENSMUST00000014065 Scaf11E9PZM7 1456 aaKnown RBP12.85□□□□□ -0.35
Clip3-201ENSMUST00000014065 PalmQ9Z0P4 383 aa12.85□□□□□ -0.35
Clip3-201ENSMUST00000014065 Utp14aQ640M1 767 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms