RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 Dusp9Q7TNL7 452 aa9.91□□□□□ -0.82
Cux1-201ENSMUST00000004097 Vps37dQ810I0 261 aa9.91□□□□□ -0.82
Cux1-201ENSMUST00000004097 NgdnQ9DB96 315 aaKnown RBP9.91□□□□□ -0.82
Cux1-201ENSMUST00000004097 L1td1Q587J6 782 aaKnown RBP9.91□□□□□ -0.82
Cux1-201ENSMUST00000004097 Usp48Q3V0C5 1052 aa9.91□□□□□ -0.82
Cux1-201ENSMUST00000004097 Filip1lQ6P6L0 1131 aa9.91□□□□□ -0.82
Cux1-201ENSMUST00000004097 Pde3aQ9Z0X4 1141 aa9.91□□□□□ -0.82
Cux1-201ENSMUST00000004097 Triml2E9PW10 424 aa9.9□□□□□ -0.82
Cux1-201ENSMUST00000004097 Trim30aP15533 496 aa9.9□□□□□ -0.82
Cux1-201ENSMUST00000004097 Usp40Q8BWR4 1235 aa9.9□□□□□ -0.82
Cux1-201ENSMUST00000004097 A0A1L1SQF0 893 aa9.9□□□□□ -0.82
Cux1-201ENSMUST00000004097 Rab11fip3Q8CHD8 1047 aa9.9□□□□□ -0.82
Cux1-201ENSMUST00000004097 Rapgef4Q9EQZ6 1011 aa9.9□□□□□ -0.82
Cux1-201ENSMUST00000004097 NaspQ99MD9 773 aaKnown RBP9.9□□□□□ -0.82
Cux1-201ENSMUST00000004097 Sart1Q9Z315 806 aaKnown RBP9.9□□□□□ -0.83
Cux1-201ENSMUST00000004097 WaplQ65Z40 1200 aaKnown RBP9.89□□□□□ -0.83
Cux1-201ENSMUST00000004097 Fkbp4P30416 458 aa9.89□□□□□ -0.83
Cux1-201ENSMUST00000004097 Gigyf1Q99MR1 1044 aaKnown RBP9.89□□□□□ -0.83
Cux1-201ENSMUST00000004097 Homer1Q9Z2Y3 366 aa9.89□□□□□ -0.83
Cux1-201ENSMUST00000004097 Rbm25B2RY56 838 aaKnown RBP9.89□□□□□ -0.83
Cux1-201ENSMUST00000004097 Pnmal2G3X9N3 661 aa9.89□□□□□ -0.83
Cux1-201ENSMUST00000004097 Necab1Q8BG18 352 aa9.89□□□□□ -0.83
Cux1-201ENSMUST00000004097 Hmox1P14901 289 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Ncbp1Q3UYV9 790 aaKnown RBP9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Nectin2P32507 530 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Nol12Q8BG17 217 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 IncenpQ9WU62 880 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Usp16Q99LG0 825 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Erc1Q99MI1 1120 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Cfap69Q8BH53 942 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Gimap5Q8BWF2 308 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Mad1l1Q9WTX8 717 aaKnown RBP9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Nup155Q99P88 1391 aaKnown RBP9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 PhaxQ9JJT9 385 aaKnown RBP9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Prl7d1P04769 244 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 SfswapQ3USH5 945 aaKnown RBP9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Q9D9H8 365 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Soga1E1U8D0 1418 aa9.88□□□□□ -0.83
Cux1-201ENSMUST00000004097 Mrvi1Q9WUX5 899 aaKnown RBP9.87□□□□□ -0.83
Cux1-201ENSMUST00000004097 Babam1Q3UI43 333 aa9.87□□□□□ -0.83
Cux1-201ENSMUST00000004097 Dnajc2P54103 621 aaKnown RBP9.87□□□□□ -0.83
Cux1-201ENSMUST00000004097 Nol8Q3UHX0 1147 aaKnown RBP9.87□□□□□ -0.83
Cux1-201ENSMUST00000004097 Rai14Q9EP71 979 aaKnown RBP9.87□□□□□ -0.83
Cux1-201ENSMUST00000004097 Trim34bJ3QNR8 485 aa9.87□□□□□ -0.83
Cux1-201ENSMUST00000004097 SlkO54988 1233 aa9.87□□□□□ -0.83
Cux1-201ENSMUST00000004097 Fam71e1A1L3C1 212 aa9.86□□□□□ -0.83
Cux1-201ENSMUST00000004097 Plekhg2Q6KAU7 1340 aa9.86□□□□□ -0.83
Cux1-201ENSMUST00000004097 Rnf20Q5DTM8 973 aa9.86□□□□□ -0.83
Cux1-201ENSMUST00000004097 Hap1O35668 628 aa9.86□□□□□ -0.83
Cux1-201ENSMUST00000004097 EspnQ9ET47 871 aa9.86□□□□□ -0.83
Cux1-201ENSMUST00000004097 Gcom1E9PZ54 550 aa9.86□□□□□ -0.83
Cux1-201ENSMUST00000004097 MyzapQ3UIJ9 466 aa9.86□□□□□ -0.83
Cux1-201ENSMUST00000004097 Bcl11aQ9QYE3 773 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Secisbp2lQ6A098 1086 aaKnown RBP9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 St18Q80TY4 1045 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Dph6Q9CQ28 267 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Sin3aQ60520 1274 aaKnown RBP9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Klc3Q91W40 508 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Polr3dQ91WD1 398 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Slc13a4Q8BZ82 625 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Aebp2Q9Z248 504 aaKnown RBP9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Plekhd1B2RPU2 505 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Atp6v1dP57746 247 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Nutm1Q8BHP2 1126 aa9.85□□□□□ -0.83
Cux1-201ENSMUST00000004097 Epb41l2O70318 988 aaKnown RBP9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 Aebp1Q640N1 1128 aa9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 Tmx4Q8C0L0 335 aa9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 Fmnl2A2APV2 1086 aa9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 Sv2bQ8BG39 683 aa9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 SrrtQ99MR6 875 aaKnown RBP9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 Gsto1O09131 240 aa9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 MpripP97434 1024 aa9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 Znf18Q810A1 556 aa9.84□□□□□ -0.83
Cux1-201ENSMUST00000004097 Mcm10Q0VBD2 885 aa9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 G3bp1P97855 465 aaKnown RBP9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 Ankrd13dQ6PD24 605 aa9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 Baz1bQ9Z277 1479 aa9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 Mtmr7Q9Z2C9 660 aa9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 GancQ8BVW0 898 aa9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 Zmynd15Q8C0R7 736 aa9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 Ipo8Q7TMY7 1010 aa9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 Samm50Q8BGH2 469 aa9.83□□□□□ -0.84
Cux1-201ENSMUST00000004097 Ccdc85cE9Q6B2 420 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Zrsr2Q62377 462 aaKnown RBP9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Zeb2Q9R0G7 1215 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Usp5P56399 858 aaKnown RBP9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Epb41l3Q9WV92 929 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Gpatch3Q8BIY1 525 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 MpndQ3TV65 487 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Ric3Q8BPM6 367 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Lrrc45Q8CIM1 670 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Zscan21Q07231 555 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Phf23Q8BSN5 401 aa9.82□□□□□ -0.84
Cux1-201ENSMUST00000004097 Exoc6Q8R313 802 aa9.81□□□□□ -0.84
Cux1-201ENSMUST00000004097 Tmod2Q9JKK7 351 aa9.81□□□□□ -0.84
Cux1-201ENSMUST00000004097 Mbd3Q9Z2D8 285 aaKnown RBP9.81□□□□□ -0.84
Cux1-201ENSMUST00000004097 Dcaf1Q80TR8 1506 aa9.81□□□□□ -0.84
Cux1-201ENSMUST00000004097 G430095P16RikE9Q913 147 aa9.81□□□□□ -0.84
Cux1-201ENSMUST00000004097 Anks4bQ8K3X6 423 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 76.4 ms