RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeastyeast

Gene CDA2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDA2YLR308W TCB3Q03640 1545 aaKnown RBP1.38□□□□□ -2.19
CDA2YLR308W TIM12P32830 109 aa1.37□□□□□ -2.19
CDA2YLR308W YDL022C-AP0C5L6 82 aa1.36□□□□□ -2.19
CDA2YLR308W QCR9P22289 66 aa1.36□□□□□ -2.19
CDA2YLR308W SGF11Q03067 99 aa1.36□□□□□ -2.19
CDA2YLR308W YOL164W-AQ3E7A5 60 aa1.36□□□□□ -2.19
CDA2YLR308W RPL38P49167 78 aaKnown RBP1.35□□□□□ -2.19
CDA2YLR308W DNF1P32660 1571 aa1.34□□□□□ -2.19
CDA2YLR308W YJR107C-AP0CT86 78 aa1.34□□□□□ -2.19
CDA2YLR308W UFD4P33202 1483 aa1.33□□□□□ -2.2
CDA2YLR308W ATX1P38636 73 aa1.33□□□□□ -2.2
CDA2YLR308W YNL190WP53872 204 aa1.33□□□□□ -2.2
CDA2YLR308W YNL198CP40166 100 aa1.32□□□□□ -2.2
CDA2YLR308W SDH6Q3E785 79 aa1.32□□□□□ -2.2
CDA2YLR308W YGR035W-AQ45U48 73 aa1.32□□□□□ -2.2
CDA2YLR308W SCC2Q04002 1493 aa1.31□□□□□ -2.2
CDA2YLR308W YKL018C-AQ3E7A7 99 aa1.29□□□□□ -2.2
CDA2YLR308W YOR032W-AQ8TGS1 66 aa1.29□□□□□ -2.2
CDA2YLR308W YPR108W-AQ3E7B3 70 aa1.27□□□□□ -2.21
CDA2YLR308W YFL041W-AQ3E817 63 aa1.27□□□□□ -2.21
CDA2YLR308W ARO1P08566 1588 aaKnown RBP1.26□□□□□ -2.21
CDA2YLR308W SSS1P35179 80 aa1.26□□□□□ -2.21
CDA2YLR308W YOL097W-AQ3E7Y9 61 aa1.26□□□□□ -2.21
CDA2YLR308W DNF2Q12675 1612 aa1.25□□□□□ -2.21
CDA2YLR308W IML1P47170 1584 aa1.25□□□□□ -2.21
CDA2YLR308W PAU7P39545 55 aa1.24□□□□□ -2.21
CDA2YLR308W ERI1P62651 68 aaKnown RBP1.23□□□□□ -2.21
CDA2YLR308W ATP17Q06405 101 aa1.23□□□□□ -2.21
CDA2YLR308W SEN1Q00416 2231 aaKnown RBP1.22□□□□□ -2.21
CDA2YLR308W VPS15P22219 1454 aa1.2□□□□□ -2.22
CDA2YLR308W MYO4P32492 1471 aa1.19□□□□□ -2.22
CDA2YLR308W YFR009W-AP0C5M9 85 aa1.19□□□□□ -2.22
CDA2YLR308W YBR032WP38223 100 aa1.19□□□□□ -2.22
CDA2YLR308W SPI1P40092 148 aa1.19□□□□□ -2.22
CDA2YLR308W YIL134C-AQ45U18 67 aa1.19□□□□□ -2.22
CDA2YLR308W RPO21P04050 1733 aaKnown RBP1.18□□□□□ -2.22
CDA2YLR308W YOL131WQ08270 108 aa1.18□□□□□ -2.22
CDA2YLR308W YFR010W-AP0C5N0 62 aa1.17□□□□□ -2.22
CDA2YLR308W TAO3P40468 2376 aa1.16□□□□□ -2.22
CDA2YLR308W SPO14P36126 1683 aa1.16□□□□□ -2.22
CDA2YLR308W YBR016WP38216 128 aa1.16□□□□□ -2.22
CDA2YLR308W YLR146W-AQ2V2P1 62 aa1.16□□□□□ -2.22
CDA2YLR308W RPO31P04051 1460 aa1.16□□□□□ -2.22
CDA2YLR308W IQG1Q12280 1495 aa1.16□□□□□ -2.22
CDA2YLR308W RPS29BP41058 56 aaKnown RBP1.15□□□□□ -2.23
CDA2YLR308W YDR246W-AQ3E763 66 aa1.15□□□□□ -2.23
CDA2YLR308W YSY6P38374 65 aa1.14□□□□□ -2.23
CDA2YLR308W EDC1P53080 175 aaPredicted RBP1.13□□□□□ -2.23
CDA2YLR308W YIL102C-AQ2V2P5 75 aa1.12□□□□□ -2.23
CDA2YLR308W KOG1P38873 1557 aa1.12□□□□□ -2.23
CDA2YLR308W TY3B-GQ99315 1547 aa1.11□□□□□ -2.23
CDA2YLR308W SMC4Q12267 1418 aa1.11□□□□□ -2.23
CDA2YLR308W PDR12Q02785 1511 aa1.09□□□□□ -2.24
CDA2YLR308W YBL039W-BP0C268 59 aa1.08□□□□□ -2.24
CDA2YLR308W RPS30AP0CX33 63 aaKnown RBP1.08□□□□□ -2.24
CDA2YLR308W RPS30BP0CX34 63 aaKnown RBP1.08□□□□□ -2.24
CDA2YLR308W YBR200W-AQ3E755 54 aa1.08□□□□□ -2.24
CDA2YLR308W HUB1Q6Q546 73 aa1.08□□□□□ -2.24
CDA2YLR308W IRC20Q06554 1556 aa1.08□□□□□ -2.24
CDA2YLR308W VMR1P38735 1592 aa1.05□□□□□ -2.24
CDA2YLR308W VMA9Q3E7B6 73 aa1.05□□□□□ -2.24
CDA2YLR308W RPS27AP35997 82 aaKnown RBP1.04□□□□□ -2.24
CDA2YLR308W YDR182W-AQ3E796 67 aa1.04□□□□□ -2.24
CDA2YLR308W YOR011W-AQ3E807 68 aa1.02□□□□□ -2.25
CDA2YLR308W YOR394C-AQ8TGJ0 55 aa1.02□□□□□ -2.25
CDA2YLR308W YBL044WP38194 122 aa1.01□□□□□ -2.25
CDA2YLR308W OLI1P61829 76 aa1.01□□□□□ -2.25
CDA2YLR308W YBT1P32386 1661 aa1□□□□□ -2.25
CDA2YLR308W TY1B-DR4Q07793 1604 aa1□□□□□ -2.25
CDA2YLR308W VTH1P40438 1549 aa0.99□□□□□ -2.25
CDA2YLR308W VTH2P40890 1549 aa0.99□□□□□ -2.25
CDA2YLR308W BCK1Q01389 1478 aa0.99□□□□□ -2.25
CDA2YLR308W MMS1Q06211 1407 aa0.99□□□□□ -2.25
CDA2YLR308W HAP1P0CE41 1502 aa0.98□□□□□ -2.25
CDA2YLR308W CDC25P04821 1589 aa0.97□□□□□ -2.25
CDA2YLR308W YOL166W-AQ8TGJ1 51 aa0.97□□□□□ -2.25
CDA2YLR308W PDR5P33302 1511 aaKnown RBP0.96□□□□□ -2.26
CDA2YLR308W YGR025WP53216 100 aa0.96□□□□□ -2.26
CDA2YLR308W USO1P25386 1790 aa0.96□□□□□ -2.26
CDA2YLR308W MON2P48563 1636 aaPredicted RBP0.94□□□□□ -2.26
CDA2YLR308W PDR15Q04182 1529 aaKnown RBP0.94□□□□□ -2.26
CDA2YLR308W YOR093CQ12275 1648 aa0.93□□□□□ -2.26
CDA2YLR308W YCR108CQ3E819 63 aa0.93□□□□□ -2.26
CDA2YLR308W YMR001C-AQ8TGS9 76 aa0.93□□□□□ -2.26
CDA2YLR308W NUP188P52593 1655 aaKnown RBP0.93□□□□□ -2.26
CDA2YLR308W YLR157W-DP0CE99 70 aa0.92□□□□□ -2.26
CDA2YLR308W SIP18P50263 79 aa0.92□□□□□ -2.26
CDA2YLR308W YOR192C-CQ3E736 78 aa0.88□□□□□ -2.27
CDA2YLR308W YCF1P39109 1515 aaKnown RBP0.88□□□□□ -2.27
CDA2YLR308W SPT6P23615 1451 aaKnown RBP0.87□□□□□ -2.27
CDA2YLR308W SNQ2P32568 1501 aaKnown RBP0.87□□□□□ -2.27
CDA2YLR308W YKL023C-AQ2V2P3 75 aa0.84□□□□□ -2.27
CDA2YLR308W RPS27BP38711 82 aa0.83□□□□□ -2.28
CDA2YLR308W YOR008C-AQ3E7B9 74 aa0.8□□□□□ -2.28
CDA2YLR308W YBR230W-AQ3E762 66 aa0.79□□□□□ -2.28
CDA2YLR308W ULS1Q08562 1619 aa0.78□□□□□ -2.28
CDA2YLR308W SSK2P53599 1579 aa0.78□□□□□ -2.29
CDA2YLR308W TOS6P48560 102 aa0.77□□□□□ -2.29
CDA2YLR308W NUP192P47054 1683 aa0.75□□□□□ -2.29
CDA2YLR308W UTP20P35194 2493 aaKnown RBP0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms