RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeastyeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX1YKL197C HUG1Q6Q5K6 68 aa2.43□□□□□ -2.02
PEX1YKL197C RPL38P49167 78 aaKnown RBP2.43□□□□□ -2.02
PEX1YKL197C YNL162W-AQ3E7A8 72 aa2.42□□□□□ -2.02
PEX1YKL197C COA3Q3E7B2 85 aa2.42□□□□□ -2.02
PEX1YKL197C SHU1P38751 150 aa2.42□□□□□ -2.02
PEX1YKL197C ACC1Q00955 2233 aaKnown RBP2.42□□□□□ -2.02
PEX1YKL197C BSC4P53841 131 aa2.42□□□□□ -2.02
PEX1YKL197C YDR182W-AQ3E796 67 aa2.42□□□□□ -2.02
PEX1YKL197C RPS11AP0CX47 156 aaKnown RBP2.41□□□□□ -2.02
PEX1YKL197C RPS11BP0CX48 156 aaKnown RBP2.41□□□□□ -2.02
PEX1YKL197C YMR141CP40211 102 aa2.4□□□□□ -2.03
PEX1YKL197C VPS13Q07878 3144 aa2.4□□□□□ -2.03
PEX1YKL197C YBR027CP38220 110 aa2.39□□□□□ -2.03
PEX1YKL197C MRPS12P53732 153 aa2.39□□□□□ -2.03
PEX1YKL197C BLM10P43583 2143 aa2.39□□□□□ -2.03
PEX1YKL197C YHR032W-AP0C5N6 59 aa2.38□□□□□ -2.03
PEX1YKL197C YIL102CP40488 101 aa2.38□□□□□ -2.03
PEX1YKL197C TMC1Q08422 150 aaPredicted RBP2.38□□□□□ -2.03
PEX1YKL197C YJL027CP47063 138 aaPredicted RBP2.38□□□□□ -2.03
PEX1YKL197C MGR2Q02889 113 aa2.38□□□□□ -2.03
PEX1YKL197C YJR107C-AP0CT86 78 aa2.37□□□□□ -2.03
PEX1YKL197C YBR219CP38317 127 aa2.37□□□□□ -2.03
PEX1YKL197C SEN1Q00416 2231 aaKnown RBP2.37□□□□□ -2.03
PEX1YKL197C DAD4P69851 72 aa2.37□□□□□ -2.03
PEX1YKL197C LCL2Q08045 131 aa2.37□□□□□ -2.03
PEX1YKL197C YPR108W-AQ3E7B3 70 aa2.36□□□□□ -2.03
PEX1YKL197C AQY2P0CD90 149 aa2.35□□□□□ -2.03
PEX1YKL197C YEL014CP39999 101 aa2.35□□□□□ -2.03
PEX1YKL197C YOL085CQ99345 113 aa2.35□□□□□ -2.03
PEX1YKL197C YPR195CQ06594 109 aa2.34□□□□□ -2.03
PEX1YKL197C YSF3P0C074 85 aaPredicted RBP2.33□□□□□ -2.04
PEX1YKL197C YLR157W-DP0CE99 70 aa2.33□□□□□ -2.04
PEX1YKL197C TOS6P48560 102 aa2.33□□□□□ -2.04
PEX1YKL197C SGF11Q03067 99 aa2.33□□□□□ -2.04
PEX1YKL197C YDR210WQ03482 75 aa2.33□□□□□ -2.04
PEX1YKL197C YIL046W-AQ3E7Z4 54 aa2.33□□□□□ -2.04
PEX1YKL197C YGL014C-AP0C5N1 53 aa2.33□□□□□ -2.04
PEX1YKL197C COX8P04039 78 aa2.33□□□□□ -2.04
PEX1YKL197C ATP17Q06405 101 aa2.33□□□□□ -2.04
PEX1YKL197C HUB1Q6Q546 73 aa2.33□□□□□ -2.04
PEX1YKL197C YAL067W-AQ8TGK6 75 aa2.32□□□□□ -2.04
PEX1YKL197C YNL122CP53921 115 aaPredicted RBP2.32□□□□□ -2.04
PEX1YKL197C ATP18P81450 59 aa2.32□□□□□ -2.04
PEX1YKL197C YDR115WQ04598 105 aa2.32□□□□□ -2.04
PEX1YKL197C YMR001C-AQ8TGS9 76 aa2.32□□□□□ -2.04
PEX1YKL197C TAO3P40468 2376 aa2.32□□□□□ -2.04
PEX1YKL197C YCR001WP25347 104 aa2.31□□□□□ -2.04
PEX1YKL197C YIL086CP40503 102 aa2.31□□□□□ -2.04
PEX1YKL197C YJR146WP47174 117 aa2.31□□□□□ -2.04
PEX1YKL197C YFR009W-AP0C5M9 85 aa2.31□□□□□ -2.04
PEX1YKL197C YOR008C-AQ3E7B9 74 aa2.31□□□□□ -2.04
PEX1YKL197C YMR122W-AQ3E842 84 aa2.31□□□□□ -2.04
PEX1YKL197C YPR117WQ06116 2489 aa2.31□□□□□ -2.04
PEX1YKL197C YPR010C-AA5Z2X5 72 aa2.31□□□□□ -2.04
PEX1YKL197C YCL048W-AQ2V2Q2 79 aa2.31□□□□□ -2.04
PEX1YKL197C FAB1P34756 2278 aa2.3□□□□□ -2.04
PEX1YKL197C URA2P07259 2214 aaKnown RBP2.3□□□□□ -2.04
PEX1YKL197C BEM2P39960 2167 aaKnown RBP2.29□□□□□ -2.04
PEX1YKL197C YLR255CO13574 117 aa2.29□□□□□ -2.04
PEX1YKL197C Q0032Q9ZZX7 96 aa2.29□□□□□ -2.04
PEX1YKL197C SDH6Q3E785 79 aa2.28□□□□□ -2.04
PEX1YKL197C RPL33BP41056 107 aaKnown RBP2.28□□□□□ -2.04
PEX1YKL197C YBR201C-AQ2V2Q3 67 aa2.28□□□□□ -2.04
PEX1YKL197C MVB12P42939 101 aa2.27□□□□□ -2.05
PEX1YKL197C VAM10Q08474 114 aa2.27□□□□□ -2.05
PEX1YKL197C CUP1-1P0CX80 61 aa2.27□□□□□ -2.05
PEX1YKL197C CUP1-2P0CX81 61 aa2.27□□□□□ -2.05
PEX1YKL197C YMR254CQ04838 102 aa2.27□□□□□ -2.05
PEX1YKL197C YOL013W-AP0C272 63 aaPredicted RBP2.26□□□□□ -2.05
PEX1YKL197C YDR114CQ04597 100 aa2.26□□□□□ -2.05
PEX1YKL197C YEL008WP40001 126 aa2.25□□□□□ -2.05
PEX1YKL197C YER084WP40057 128 aa2.24□□□□□ -2.05
PEX1YKL197C YGL258W-AQ3E740 77 aa2.24□□□□□ -2.05
PEX1YKL197C YLR342W-AQ3E810 57 aa2.24□□□□□ -2.05
PEX1YKL197C RPL33AP05744 107 aaKnown RBP2.23□□□□□ -2.05
PEX1YKL197C YCL042WP25572 119 aa2.23□□□□□ -2.05
PEX1YKL197C RPS27AP35997 82 aaKnown RBP2.23□□□□□ -2.05
PEX1YKL197C RPS27BP38711 82 aa2.23□□□□□ -2.05
PEX1YKL197C YBL039W-BP0C268 59 aa2.22□□□□□ -2.05
PEX1YKL197C YOR072WQ08486 104 aa2.22□□□□□ -2.05
PEX1YKL197C YDL012CQ12489 107 aa2.21□□□□□ -2.06
PEX1YKL197C YGL041C-BQ3E750 60 aa2.21□□□□□ -2.06
PEX1YKL197C TAR1Q8TGM6 124 aa2.21□□□□□ -2.06
PEX1YKL197C NCE101Q02820 53 aa2.2□□□□□ -2.06
PEX1YKL197C YBR056W-AI2HB52 66 aa2.2□□□□□ -2.06
PEX1YKL197C YLL006W-AQ3E814 58 aa2.2□□□□□ -2.06
PEX1YKL197C AUA1P32450 94 aa2.2□□□□□ -2.06
PEX1YKL197C RPL43AP0CX25 92 aaKnown RBP2.19□□□□□ -2.06
PEX1YKL197C RPL43BP0CX26 92 aa2.19□□□□□ -2.06
PEX1YKL197C YFL067WP43537 175 aa2.19□□□□□ -2.06
PEX1YKL197C YHR213W-BQ8TGK1 99 aa2.19□□□□□ -2.06
PEX1YKL197C SEC16P48415 2195 aaKnown RBP2.19□□□□□ -2.06
PEX1YKL197C YGR025WP53216 100 aa2.19□□□□□ -2.06
PEX1YKL197C POL2P21951 2222 aaKnown RBP2.19□□□□□ -2.06
PEX1YKL197C YGR240C-AQ3E786 66 aa2.17□□□□□ -2.06
PEX1YKL197C YJL144WP47009 104 aa2.17□□□□□ -2.06
PEX1YKL197C YBR200W-AQ3E755 54 aa2.17□□□□□ -2.06
PEX1YKL197C YJL133C-AQ3E7A3 74 aa2.17□□□□□ -2.06
PEX1YKL197C TEL1P38110 2787 aa2.17□□□□□ -2.06
PEX1YKL197C YJR128WP47162 119 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms