RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C MVB12P42939 101 aa1.06□□□□□ -2.24
RTT101YJL047C IML1P47170 1584 aa1.06□□□□□ -2.24
RTT101YJL047C ERI1P62651 68 aaKnown RBP1.06□□□□□ -2.24
RTT101YJL047C YOR072WQ08486 104 aa1.06□□□□□ -2.24
RTT101YJL047C YDR246W-AQ3E763 66 aa1.06□□□□□ -2.24
RTT101YJL047C CDC25P04821 1589 aa1.05□□□□□ -2.24
RTT101YJL047C YMR122W-AQ3E842 84 aa1.05□□□□□ -2.24
RTT101YJL047C YOR032W-AQ8TGS1 66 aa1.05□□□□□ -2.24
RTT101YJL047C YCF1P39109 1515 aaKnown RBP1.05□□□□□ -2.24
RTT101YJL047C VMA9Q3E7B6 73 aa1.05□□□□□ -2.24
RTT101YJL047C YNL042W-BQ3E7Z2 85 aa1.05□□□□□ -2.24
RTT101YJL047C YBR201C-AQ2V2Q3 67 aa1.04□□□□□ -2.24
RTT101YJL047C YKL018C-AQ3E7A7 99 aa1.04□□□□□ -2.24
RTT101YJL047C SNQ2P32568 1501 aaKnown RBP1.04□□□□□ -2.24
RTT101YJL047C YBT1P32386 1661 aa1.04□□□□□ -2.24
RTT101YJL047C SPI1P40092 148 aa1.04□□□□□ -2.24
RTT101YJL047C YJR128WP47162 119 aa1.04□□□□□ -2.24
RTT101YJL047C YMR007WQ03675 126 aa1.04□□□□□ -2.24
RTT101YJL047C Q0032Q9ZZX7 96 aa1.04□□□□□ -2.24
RTT101YJL047C SPT6P23615 1451 aaKnown RBP1.03□□□□□ -2.24
RTT101YJL047C PDR5P33302 1511 aaKnown RBP1.03□□□□□ -2.24
RTT101YJL047C VTH1P40438 1549 aa1.03□□□□□ -2.24
RTT101YJL047C VTH2P40890 1549 aa1.03□□□□□ -2.24
RTT101YJL047C YIL102C-AQ2V2P5 75 aa1.03□□□□□ -2.24
RTT101YJL047C TY3B-GQ99315 1547 aa1.03□□□□□ -2.24
RTT101YJL047C SSK2P53599 1579 aa1.02□□□□□ -2.25
RTT101YJL047C HHY1P39982 102 aa1.02□□□□□ -2.25
RTT101YJL047C URA2P07259 2214 aaKnown RBP1.02□□□□□ -2.25
RTT101YJL047C USO1P25386 1790 aa1.01□□□□□ -2.25
RTT101YJL047C YSY6P38374 65 aa1.01□□□□□ -2.25
RTT101YJL047C YIL102CP40488 101 aa1.01□□□□□ -2.25
RTT101YJL047C YNL190WP53872 204 aa1.01□□□□□ -2.25
RTT101YJL047C YOR034C-AQ3E735 80 aa1.01□□□□□ -2.25
RTT101YJL047C SGF11Q03067 99 aa1□□□□□ -2.25
RTT101YJL047C BCK1Q01389 1478 aa1□□□□□ -2.25
RTT101YJL047C NUP188P52593 1655 aaKnown RBP1□□□□□ -2.25
RTT101YJL047C IRC20Q06554 1556 aa1□□□□□ -2.25
RTT101YJL047C PAU7P39545 55 aa1□□□□□ -2.25
RTT101YJL047C SNF2P22082 1703 aa1□□□□□ -2.25
RTT101YJL047C HUA1P40325 198 aa0.99□□□□□ -2.25
RTT101YJL047C ATP18P81450 59 aa0.99□□□□□ -2.25
RTT101YJL047C YOR093CQ12275 1648 aa0.99□□□□□ -2.25
RTT101YJL047C MMS1Q06211 1407 aa0.99□□□□□ -2.25
RTT101YJL047C ULS1Q08562 1619 aa0.99□□□□□ -2.25
RTT101YJL047C AUA1P32450 94 aa0.98□□□□□ -2.25
RTT101YJL047C ATP17Q06405 101 aa0.98□□□□□ -2.25
RTT101YJL047C PEP1P32319 1579 aa0.98□□□□□ -2.25
RTT101YJL047C YMR141CP40211 102 aa0.97□□□□□ -2.25
RTT101YJL047C EDC1P53080 175 aaPredicted RBP0.97□□□□□ -2.25
RTT101YJL047C VMR1P38735 1592 aa0.97□□□□□ -2.25
RTT101YJL047C HKR1P41809 1802 aa0.97□□□□□ -2.25
RTT101YJL047C COX7P10174 60 aa0.97□□□□□ -2.25
RTT101YJL047C YHR213W-BQ8TGK1 99 aa0.97□□□□□ -2.25
RTT101YJL047C RPS30AP0CX33 63 aaKnown RBP0.96□□□□□ -2.26
RTT101YJL047C RPS30BP0CX34 63 aaKnown RBP0.96□□□□□ -2.26
RTT101YJL047C RPC10P40422 70 aa0.96□□□□□ -2.26
RTT101YJL047C SDH6Q3E785 79 aa0.95□□□□□ -2.26
RTT101YJL047C YDR182W-AQ3E796 67 aa0.94□□□□□ -2.26
RTT101YJL047C YOL097W-AQ3E7Y9 61 aa0.94□□□□□ -2.26
RTT101YJL047C YPR108W-AQ3E7B3 70 aa0.93□□□□□ -2.26
RTT101YJL047C YKL023C-AQ2V2P3 75 aa0.93□□□□□ -2.26
RTT101YJL047C YBR072C-AQ3E794 53 aa0.93□□□□□ -2.26
RTT101YJL047C YOL166W-AQ8TGJ1 51 aa0.93□□□□□ -2.26
RTT101YJL047C RPL38P49167 78 aaKnown RBP0.92□□□□□ -2.26
RTT101YJL047C YOR192C-CQ3E736 78 aa0.92□□□□□ -2.26
RTT101YJL047C RPL43AP0CX25 92 aaKnown RBP0.91□□□□□ -2.26
RTT101YJL047C RPL43BP0CX26 92 aa0.91□□□□□ -2.26
RTT101YJL047C YJR107C-AP0CT86 78 aa0.9□□□□□ -2.26
RTT101YJL047C HUB1Q6Q546 73 aa0.9□□□□□ -2.26
RTT101YJL047C RPL37AP49166 88 aaKnown RBP0.9□□□□□ -2.27
RTT101YJL047C THO2P53552 1597 aaKnown RBP0.9□□□□□ -2.27
RTT101YJL047C PDR15Q04182 1529 aaKnown RBP0.9□□□□□ -2.27
RTT101YJL047C YBL039W-BP0C268 59 aa0.89□□□□□ -2.27
RTT101YJL047C YLR146W-AQ2V2P1 62 aa0.89□□□□□ -2.27
RTT101YJL047C KOG1P38873 1557 aa0.89□□□□□ -2.27
RTT101YJL047C NUP192P47054 1683 aa0.88□□□□□ -2.27
RTT101YJL047C YLR157W-EP0CF00 54 aa0.88□□□□□ -2.27
RTT101YJL047C YBR200W-AQ3E755 54 aa0.88□□□□□ -2.27
RTT101YJL047C YBR032WP38223 100 aa0.88□□□□□ -2.27
RTT101YJL047C YLR307C-AQ3E825 87 aa0.88□□□□□ -2.27
RTT101YJL047C STU1P38198 1513 aa0.87□□□□□ -2.27
RTT101YJL047C RPS27AP35997 82 aaKnown RBP0.86□□□□□ -2.27
RTT101YJL047C YOL164W-AQ3E7A5 60 aa0.85□□□□□ -2.27
RTT101YJL047C YMR001C-AQ8TGS9 76 aa0.85□□□□□ -2.27
RTT101YJL047C YLR157W-DP0CE99 70 aa0.85□□□□□ -2.27
RTT101YJL047C YOR011W-AQ3E807 68 aa0.85□□□□□ -2.27
RTT101YJL047C RKR1Q04781 1562 aa0.84□□□□□ -2.27
RTT101YJL047C CHC1P22137 1653 aaKnown RBP0.84□□□□□ -2.27
RTT101YJL047C YOR394C-AQ8TGJ0 55 aa0.84□□□□□ -2.28
RTT101YJL047C MLP2P40457 1679 aa0.84□□□□□ -2.28
RTT101YJL047C HIR3P47171 1648 aa0.82□□□□□ -2.28
RTT101YJL047C BUD3P25558 1636 aa0.81□□□□□ -2.28
RTT101YJL047C NUP170P38181 1502 aa0.81□□□□□ -2.28
RTT101YJL047C YBR016WP38216 128 aa0.81□□□□□ -2.28
RTT101YJL047C RPL37BP51402 88 aaKnown RBP0.8□□□□□ -2.28
RTT101YJL047C YFR009W-AP0C5M9 85 aa0.8□□□□□ -2.28
RTT101YJL047C FIG2P25653 1609 aa0.8□□□□□ -2.28
RTT101YJL047C OLI1P61829 76 aa0.79□□□□□ -2.28
RTT101YJL047C ATG2P53855 1592 aa0.78□□□□□ -2.28
RTT101YJL047C SEN1Q00416 2231 aaKnown RBP0.78□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms