RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W YKL023C-AQ2V2P3 75 aa0.53□□□□□ -2.32
RPL40AYIL148W YOR011W-AQ3E807 68 aa0.53□□□□□ -2.32
RPL40AYIL148W BRR2P32639 2163 aaKnown RBP0.53□□□□□ -2.32
RPL40AYIL148W APC1P53886 1748 aa0.52□□□□□ -2.33
RPL40AYIL148W MOT1P32333 1867 aa0.52□□□□□ -2.33
RPL40AYIL148W YFR009W-AP0C5M9 85 aa0.52□□□□□ -2.33
RPL40AYIL148W YLR157W-DP0CE99 70 aa0.52□□□□□ -2.33
RPL40AYIL148W YMR001C-AQ8TGS9 76 aa0.52□□□□□ -2.33
RPL40AYIL148W DNF1P32660 1571 aa0.52□□□□□ -2.33
RPL40AYIL148W KOG1P38873 1557 aa0.52□□□□□ -2.33
RPL40AYIL148W ECM29P38737 1868 aa0.52□□□□□ -2.33
RPL40AYIL148W TY1B-LR3P0C2I6 1755 aaKnown RBP0.51□□□□□ -2.33
RPL40AYIL148W TY1B-PR3P0C2J1 1755 aaKnown RBP0.51□□□□□ -2.33
RPL40AYIL148W YGR025WP53216 100 aa0.51□□□□□ -2.33
RPL40AYIL148W RRP5Q05022 1729 aaKnown RBP0.51□□□□□ -2.33
RPL40AYIL148W DNF3Q12674 1656 aa0.51□□□□□ -2.33
RPL40AYIL148W YBR200W-AQ3E755 54 aa0.51□□□□□ -2.33
RPL40AYIL148W YBR230W-AQ3E762 66 aa0.51□□□□□ -2.33
RPL40AYIL148W YOR008C-AQ3E7B9 74 aa0.51□□□□□ -2.33
RPL40AYIL148W YOR394C-AQ8TGJ0 55 aa0.51□□□□□ -2.33
RPL40AYIL148W TY2B-CP25384 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W RIM15P43565 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W TY1B-DR1Q03855 1755 aa0.5□□□□□ -2.33
RPL40AYIL148W TY2B-DR1Q12472 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W TY1B-BLQ12490 1755 aa0.5□□□□□ -2.33
RPL40AYIL148W TY1B-DR3Q99231 1755 aa0.5□□□□□ -2.33
RPL40AYIL148W DNF2Q12675 1612 aa0.5□□□□□ -2.33
RPL40AYIL148W SNQ2P32568 1501 aaKnown RBP0.5□□□□□ -2.33
RPL40AYIL148W YDR246W-AQ3E763 66 aa0.5□□□□□ -2.33
RPL40AYIL148W COA2Q3E823 68 aa0.5□□□□□ -2.33
RPL40AYIL148W TY2B-LR1P0C2J3 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W TY2B-FP0CX63 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W TY2B-GR2P0CX64 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W UTP10P42945 1769 aaKnown RBP0.5□□□□□ -2.33
RPL40AYIL148W TY2B-DR2Q03494 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W TY2B-OR1Q12113 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W TY2B-BQ12491 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W TY2B-OR2Q12501 1770 aa0.5□□□□□ -2.33
RPL40AYIL148W TY3B-GQ99315 1547 aa0.49□□□□□ -2.33
RPL40AYIL148W BCK1Q01389 1478 aa0.49□□□□□ -2.33
RPL40AYIL148W PMD1P32634 1753 aa0.49□□□□□ -2.33
RPL40AYIL148W VTH1P40438 1549 aa0.48□□□□□ -2.33
RPL40AYIL148W VTH2P40890 1549 aa0.48□□□□□ -2.33
RPL40AYIL148W PDR15Q04182 1529 aaKnown RBP0.48□□□□□ -2.33
RPL40AYIL148W TY2B-DR3Q07791 1770 aaKnown RBP0.48□□□□□ -2.33
RPL40AYIL148W YOL166W-AQ8TGJ1 51 aa0.48□□□□□ -2.33
RPL40AYIL148W SSK2P53599 1579 aa0.48□□□□□ -2.33
RPL40AYIL148W YCF1P39109 1515 aaKnown RBP0.48□□□□□ -2.33
RPL40AYIL148W SPT6P23615 1451 aaKnown RBP0.48□□□□□ -2.33
RPL40AYIL148W TY1B-DR6P0C2I3 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-LR2P0C2I5 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-JR2P47100 1755 aaKnown RBP0.47□□□□□ -2.33
RPL40AYIL148W TY1B-ER2Q03619 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-MR1Q04214 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-MR2Q04670 1755 aaKnown RBP0.47□□□□□ -2.33
RPL40AYIL148W TY1B-NL1Q12112 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-GR1Q12141 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-GR3Q12316 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-PLQ12414 1755 aaKnown RBP0.47□□□□□ -2.33
RPL40AYIL148W TY1B-ORQ92393 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W YBR016WP38216 128 aa0.47□□□□□ -2.33
RPL40AYIL148W VMR1P38735 1592 aa0.47□□□□□ -2.33
RPL40AYIL148W IRC20Q06554 1556 aa0.47□□□□□ -2.33
RPL40AYIL148W PDR12Q02785 1511 aa0.47□□□□□ -2.33
RPL40AYIL148W HKR1P41809 1802 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-DR5P0C2I2 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W TY1B-PR1P0C2I9 1755 aaKnown RBP0.47□□□□□ -2.33
RPL40AYIL148W TY1B-ML1Q04711 1755 aaKnown RBP0.47□□□□□ -2.33
RPL40AYIL148W TY1B-LR1Q12088 1755 aaKnown RBP0.47□□□□□ -2.33
RPL40AYIL148W TY1B-GR2Q12269 1755 aa0.47□□□□□ -2.33
RPL40AYIL148W SPO14P36126 1683 aa0.46□□□□□ -2.34
RPL40AYIL148W STT4P37297 1900 aa0.46□□□□□ -2.34
RPL40AYIL148W MON2P48563 1636 aaPredicted RBP0.46□□□□□ -2.34
RPL40AYIL148W ARO1P08566 1588 aaKnown RBP0.46□□□□□ -2.34
RPL40AYIL148W YBL044WP38194 122 aa0.46□□□□□ -2.34
RPL40AYIL148W TY1B-JR1P47098 1755 aa0.46□□□□□ -2.34
RPL40AYIL148W TY1B-ML2Q03434 1755 aaKnown RBP0.46□□□□□ -2.34
RPL40AYIL148W TY1B-ER1Q03612 1755 aa0.46□□□□□ -2.34
RPL40AYIL148W TY1B-OLQ12273 1755 aa0.46□□□□□ -2.34
RPL40AYIL148W TY1B-DR4Q07793 1604 aa0.46□□□□□ -2.34
RPL40AYIL148W CDC25P04821 1589 aa0.45□□□□□ -2.34
RPL40AYIL148W RPS27AP35997 82 aaKnown RBP0.45□□□□□ -2.34
RPL40AYIL148W YOR192C-CQ3E736 78 aa0.45□□□□□ -2.34
RPL40AYIL148W YGL258W-AQ3E740 77 aa0.45□□□□□ -2.34
RPL40AYIL148W POL2P21951 2222 aaKnown RBP0.45□□□□□ -2.34
RPL40AYIL148W FKS3Q04952 1785 aa0.45□□□□□ -2.34
RPL40AYIL148W YPR010C-AA5Z2X5 72 aa0.44□□□□□ -2.34
RPL40AYIL148W COX9P07255 59 aa0.44□□□□□ -2.34
RPL40AYIL148W TOS6P48560 102 aa0.44□□□□□ -2.34
RPL40AYIL148W YGR146C-AQ8TGT9 53 aa0.44□□□□□ -2.34
RPL40AYIL148W ULS1Q08562 1619 aa0.43□□□□□ -2.34
RPL40AYIL148W YDR524C-BQ3E6R4 66 aa0.43□□□□□ -2.34
RPL40AYIL148W YOR072W-BQ3E832 53 aa0.43□□□□□ -2.34
RPL40AYIL148W RPO21P04050 1733 aaKnown RBP0.43□□□□□ -2.34
RPL40AYIL148W SNF2P22082 1703 aa0.43□□□□□ -2.34
RPL40AYIL148W HAP1P0CE41 1502 aa0.43□□□□□ -2.34
RPL40AYIL148W YBT1P32386 1661 aa0.43□□□□□ -2.34
RPL40AYIL148W BPH1P25356 2167 aa0.42□□□□□ -2.34
RPL40AYIL148W RKR1Q04781 1562 aa0.42□□□□□ -2.34
RPL40AYIL148W YCR108CQ3E819 63 aa0.42□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms