RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	RPO31	P04051	1460 aa		1.56	□□□□□ -2.16
VMA22	YHR060W	YIL134C-A	Q45U18	67 aa		1.55	□□□□□ -2.16
VMA22	YHR060W	TY1B-DR6	P0C2I3	1755 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-LR2	P0C2I5	1755 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-JR2	P47100	1755 aa	Known RBP	1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-MR1	Q04214	1755 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-MR2	Q04670	1755 aa	Known RBP	1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-NL1	Q12112	1755 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-GR1	Q12141	1755 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-GR3	Q12316	1755 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-PL	Q12414	1755 aa	Known RBP	1.54	□□□□□ -2.16
VMA22	YHR060W	TY1B-OR	Q92393	1755 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	YFR009W-A	P0C5M9	85 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	YDR182W-A	Q3E796	67 aa		1.54	□□□□□ -2.16
VMA22	YHR060W	YFR010W-A	P0C5N0	62 aa		1.53	□□□□□ -2.16
VMA22	YHR060W	YBR016W	P38216	128 aa		1.53	□□□□□ -2.16
VMA22	YHR060W	DNF1	P32660	1571 aa		1.52	□□□□□ -2.17
VMA22	YHR060W	VMA9	Q3E7B6	73 aa		1.52	□□□□□ -2.17
VMA22	YHR060W	APC1	P53886	1748 aa		1.52	□□□□□ -2.17
VMA22	YHR060W	YDR246W-A	Q3E763	66 aa		1.51	□□□□□ -2.17
VMA22	YHR060W	TY1B-DR5	P0C2I2	1755 aa		1.51	□□□□□ -2.17
VMA22	YHR060W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	1.51	□□□□□ -2.17
VMA22	YHR060W	TY1B-ER2	Q03619	1755 aa		1.51	□□□□□ -2.17
VMA22	YHR060W	TY1B-ML1	Q04711	1755 aa	Known RBP	1.51	□□□□□ -2.17
VMA22	YHR060W	TY1B-LR1	Q12088	1755 aa	Known RBP	1.51	□□□□□ -2.17
VMA22	YHR060W	TY1B-GR2	Q12269	1755 aa		1.51	□□□□□ -2.17
VMA22	YHR060W	TY2B-LR1	P0C2J3	1770 aa		1.49	□□□□□ -2.17
VMA22	YHR060W	TY2B-F	P0CX63	1770 aa		1.49	□□□□□ -2.17
VMA22	YHR060W	TY2B-GR2	P0CX64	1770 aa		1.49	□□□□□ -2.17
VMA22	YHR060W	TY2B-DR2	Q03494	1770 aa		1.49	□□□□□ -2.17
VMA22	YHR060W	TY2B-OR1	Q12113	1770 aa		1.49	□□□□□ -2.17
VMA22	YHR060W	TY2B-B	Q12491	1770 aa		1.49	□□□□□ -2.17
VMA22	YHR060W	TY2B-OR2	Q12501	1770 aa		1.49	□□□□□ -2.17
VMA22	YHR060W	OLI1	P61829	76 aa		1.48	□□□□□ -2.17
VMA22	YHR060W	YOR011W-A	Q3E807	68 aa		1.48	□□□□□ -2.17
VMA22	YHR060W	PMD1	P32634	1753 aa		1.47	□□□□□ -2.17
VMA22	YHR060W	TY2B-DR3	Q07791	1770 aa	Known RBP	1.47	□□□□□ -2.17
VMA22	YHR060W	YBL039W-B	P0C268	59 aa		1.47	□□□□□ -2.17
VMA22	YHR060W	YGR025W	P53216	100 aa		1.47	□□□□□ -2.17
VMA22	YHR060W	STT4	P37297	1900 aa		1.46	□□□□□ -2.18
VMA22	YHR060W	RRP5	Q05022	1729 aa	Known RBP	1.46	□□□□□ -2.18
VMA22	YHR060W	SNF2	P22082	1703 aa		1.46	□□□□□ -2.18
VMA22	YHR060W	RPS30A	P0CX33	63 aa	Known RBP	1.45	□□□□□ -2.18
VMA22	YHR060W	RPS30B	P0CX34	63 aa	Known RBP	1.45	□□□□□ -2.18
VMA22	YHR060W	YBR200W-A	Q3E755	54 aa		1.45	□□□□□ -2.18
VMA22	YHR060W	HKR1	P41809	1802 aa		1.45	□□□□□ -2.18
VMA22	YHR060W	BCK1	Q01389	1478 aa		1.44	□□□□□ -2.18
VMA22	YHR060W	ARO1	P08566	1588 aa	Known RBP	1.44	□□□□□ -2.18
VMA22	YHR060W	DNF2	Q12675	1612 aa		1.44	□□□□□ -2.18
VMA22	YHR060W	TY1B-JR1	P47098	1755 aa		1.43	□□□□□ -2.18
VMA22	YHR060W	TY1B-ML2	Q03434	1755 aa	Known RBP	1.43	□□□□□ -2.18
VMA22	YHR060W	TY1B-ER1	Q03612	1755 aa		1.43	□□□□□ -2.18
VMA22	YHR060W	TY1B-OL	Q12273	1755 aa		1.43	□□□□□ -2.18
VMA22	YHR060W	KOG1	P38873	1557 aa		1.42	□□□□□ -2.18
VMA22	YHR060W	PDR12	Q02785	1511 aa		1.42	□□□□□ -2.18
VMA22	YHR060W	YOR394C-A	Q8TGJ0	55 aa		1.42	□□□□□ -2.18
VMA22	YHR060W	FKS3	Q04952	1785 aa		1.42	□□□□□ -2.18
VMA22	YHR060W	MMS1	Q06211	1407 aa		1.4	□□□□□ -2.18
VMA22	YHR060W	RPO21	P04050	1733 aa	Known RBP	1.4	□□□□□ -2.18
VMA22	YHR060W	BLM10	P43583	2143 aa		1.4	□□□□□ -2.19
VMA22	YHR060W	TY3B-G	Q99315	1547 aa		1.37	□□□□□ -2.19
VMA22	YHR060W	RPS27A	P35997	82 aa	Known RBP	1.36	□□□□□ -2.19
VMA22	YHR060W	YBL044W	P38194	122 aa		1.36	□□□□□ -2.19
VMA22	YHR060W	IRC20	Q06554	1556 aa		1.36	□□□□□ -2.19
VMA22	YHR060W	SPO14	P36126	1683 aa		1.35	□□□□□ -2.19
VMA22	YHR060W	TY1B-DR4	Q07793	1604 aa		1.35	□□□□□ -2.19
VMA22	YHR060W	MON2	P48563	1636 aa	Predicted RBP	1.34	□□□□□ -2.19
VMA22	YHR060W	PDR5	P33302	1511 aa	Known RBP	1.34	□□□□□ -2.2
VMA22	YHR060W	YKL023C-A	Q2V2P3	75 aa		1.33	□□□□□ -2.2
VMA22	YHR060W	YOL166W-A	Q8TGJ1	51 aa		1.33	□□□□□ -2.2
VMA22	YHR060W	YMR001C-A	Q8TGS9	76 aa		1.33	□□□□□ -2.2
VMA22	YHR060W	VMR1	P38735	1592 aa		1.3	□□□□□ -2.2
VMA22	YHR060W	YCF1	P39109	1515 aa	Known RBP	1.3	□□□□□ -2.2
VMA22	YHR060W	YLR157W-D	P0CE99	70 aa		1.29	□□□□□ -2.2
VMA22	YHR060W	SIP18	P50263	79 aa		1.29	□□□□□ -2.2
VMA22	YHR060W	BPH1	P25356	2167 aa		1.29	□□□□□ -2.2
VMA22	YHR060W	PDR15	Q04182	1529 aa	Known RBP	1.28	□□□□□ -2.2
VMA22	YHR060W	YBR230W-A	Q3E762	66 aa		1.27	□□□□□ -2.21
VMA22	YHR060W	VTH1	P40438	1549 aa		1.25	□□□□□ -2.21
VMA22	YHR060W	VTH2	P40890	1549 aa		1.25	□□□□□ -2.21
VMA22	YHR060W	YOR008C-A	Q3E7B9	74 aa		1.25	□□□□□ -2.21
VMA22	YHR060W	SNQ2	P32568	1501 aa	Known RBP	1.24	□□□□□ -2.21
VMA22	YHR060W	HAP1	P0CE41	1502 aa		1.23	□□□□□ -2.21
VMA22	YHR060W	PRP8	P33334	2413 aa	Known RBP	1.23	□□□□□ -2.21
VMA22	YHR060W	SPT6	P23615	1451 aa	Known RBP	1.22	□□□□□ -2.21
VMA22	YHR060W	CDC25	P04821	1589 aa		1.21	□□□□□ -2.22
VMA22	YHR060W	SSK2	P53599	1579 aa		1.21	□□□□□ -2.22
VMA22	YHR060W	YBT1	P32386	1661 aa		1.2	□□□□□ -2.22
VMA22	YHR060W	YCR108C	Q3E819	63 aa		1.2	□□□□□ -2.22
VMA22	YHR060W	NUP188	P52593	1655 aa	Known RBP	1.19	□□□□□ -2.22
VMA22	YHR060W	TOS6	P48560	102 aa		1.13	□□□□□ -2.23
VMA22	YHR060W	ULS1	Q08562	1619 aa		1.12	□□□□□ -2.23
VMA22	YHR060W	RPS27B	P38711	82 aa		1.11	□□□□□ -2.23
VMA22	YHR060W	YOR192C-C	Q3E736	78 aa		1.11	□□□□□ -2.23
VMA22	YHR060W	PEP1	P32319	1579 aa		1.1	□□□□□ -2.23
VMA22	YHR060W	USO1	P25386	1790 aa		1.1	□□□□□ -2.23
VMA22	YHR060W	YOR093C	Q12275	1648 aa		1.1	□□□□□ -2.23
VMA22	YHR060W	YGR146C-A	Q8TGT9	53 aa		1.08	□□□□□ -2.24
VMA22	YHR060W	COA2	Q3E823	68 aa		1.06	□□□□□ -2.24
VMA22	YHR060W	THO2	P53552	1597 aa	Known RBP	1.05	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms