RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YBL044WP38194 122 aa0.1□□□□□ -2.39
SMD1YGR074W CWP2P43497 92 aa0.1□□□□□ -2.39
SMD1YGR074W YDR246W-AQ3E763 66 aa0.09□□□□□ -2.4
SMD1YGR074W TY2B-LR1P0C2J3 1770 aa0.08□□□□□ -2.4
SMD1YGR074W SWM2P40342 146 aa0.07□□□□□ -2.4
SMD1YGR074W YPR145C-AQ2V2P0 78 aa0.07□□□□□ -2.4
SMD1YGR074W SIN3P22579 1536 aa0.07□□□□□ -2.4
SMD1YGR074W TY2B-BQ12491 1770 aa0.05□□□□□ -2.4
SMD1YGR074W YDL022C-AP0C5L6 82 aa0.05□□□□□ -2.4
SMD1YGR074W TY2B-FP0CX63 1770 aa0.04□□□□□ -2.4
SMD1YGR074W TY2B-GR2P0CX64 1770 aa0.04□□□□□ -2.4
SMD1YGR074W TY2B-DR2Q03494 1770 aa0.04□□□□□ -2.4
SMD1YGR074W TY2B-DR3Q07791 1770 aaKnown RBP0.04□□□□□ -2.4
SMD1YGR074W TY2B-OR1Q12113 1770 aa0.04□□□□□ -2.4
SMD1YGR074W TY2B-OR2Q12501 1770 aa0.04□□□□□ -2.4
SMD1YGR074W QCR9P22289 66 aa0.04□□□□□ -2.4
SMD1YGR074W LSM2P38203 95 aaKnown RBP0.04□□□□□ -2.4
SMD1YGR074W ATP17Q06405 101 aa0.04□□□□□ -2.4
SMD1YGR074W YGR121W-AQ3E816 71 aa0.04□□□□□ -2.4
SMD1YGR074W RPS29AP41057 56 aaKnown RBP0.03□□□□□ -2.4
SMD1YGR074W SMC4Q12267 1418 aa0.01□□□□□ -2.41
SMD1YGR074W RPO21P04050 1733 aaKnown RBP0□□□□□ -2.41
SMD1YGR074W KOG1P38873 1557 aa0□□□□□ -2.41
SMD1YGR074W IRC20Q06554 1556 aa0□□□□□ -2.41
SMD1YGR074W YKL018C-AQ3E7A7 99 aa0□□□□□ -2.41
SMD1YGR074W YGR035W-AQ45U48 73 aa0□□□□□ -2.41
SMD1YGR074W OLI1P61829 76 aa-0.01□□□□□ -2.41
SMD1YGR074W YLR146W-AQ2V2P1 62 aa-0.02□□□□□ -2.41
SMD1YGR074W TY1B-NL2Q99337 1749 aaKnown RBP-0.02□□□□□ -2.41
SMD1YGR074W RPS27AP35997 82 aaKnown RBP-0.03□□□□□ -2.41
SMD1YGR074W PAU7P39545 55 aa-0.03□□□□□ -2.41
SMD1YGR074W YDR119W-AQ2V2P9 66 aa-0.03□□□□□ -2.41
SMD1YGR074W YDR182W-AQ3E796 67 aa-0.03□□□□□ -2.41
SMD1YGR074W YOR008C-AQ3E7B9 74 aa-0.03□□□□□ -2.41
SMD1YGR074W YOR011W-AQ3E807 68 aa-0.03□□□□□ -2.41
SMD1YGR074W YMR001C-AQ8TGS9 76 aa-0.03□□□□□ -2.41
SMD1YGR074W YBR200W-AQ3E755 54 aa-0.04□□□□□ -2.42
SMD1YGR074W YOR394C-AQ8TGJ0 55 aa-0.05□□□□□ -2.42
SMD1YGR074W FKS3Q04952 1785 aa-0.06□□□□□ -2.42
SMD1YGR074W FMP27Q06179 2628 aa-0.06□□□□□ -2.42
SMD1YGR074W VTH1P40438 1549 aa-0.06□□□□□ -2.42
SMD1YGR074W VTH2P40890 1549 aa-0.06□□□□□ -2.42
SMD1YGR074W UTP20P35194 2493 aaKnown RBP-0.06□□□□□ -2.42
SMD1YGR074W DOP1Q03921 1698 aa-0.07□□□□□ -2.42
SMD1YGR074W HUB1Q6Q546 73 aa-0.07□□□□□ -2.42
SMD1YGR074W YHR213W-AQ8TGT4 77 aa-0.07□□□□□ -2.42
SMD1YGR074W ARO1P08566 1588 aaKnown RBP-0.07□□□□□ -2.42
SMD1YGR074W YBL039W-BP0C268 59 aa-0.08□□□□□ -2.42
SMD1YGR074W TIM12P32830 109 aa-0.08□□□□□ -2.42
SMD1YGR074W YOR032W-AQ8TGS1 66 aa-0.08□□□□□ -2.42
SMD1YGR074W TY3B-GQ99315 1547 aa-0.08□□□□□ -2.42
SMD1YGR074W SPO14P36126 1683 aa-0.08□□□□□ -2.42
SMD1YGR074W SPI1P40092 148 aa-0.09□□□□□ -2.42
SMD1YGR074W SIP18P50263 79 aa-0.09□□□□□ -2.42
SMD1YGR074W UFD4P33202 1483 aa-0.1□□□□□ -2.42
SMD1YGR074W IML1P47170 1584 aa-0.1□□□□□ -2.42
SMD1YGR074W SSS1P35179 80 aa-0.11□□□□□ -2.43
SMD1YGR074W TOS6P48560 102 aa-0.11□□□□□ -2.43
SMD1YGR074W TOR2P32600 2474 aaKnown RBP-0.12□□□□□ -2.43
SMD1YGR074W NUP159P40477 1460 aa-0.12□□□□□ -2.43
SMD1YGR074W MDN1Q12019 4910 aaKnown RBP-0.14□□□□□ -2.43
SMD1YGR074W YFL041W-AQ3E817 63 aa-0.14□□□□□ -2.43
SMD1YGR074W DNF2Q12675 1612 aa-0.15□□□□□ -2.43
SMD1YGR074W ERI1P62651 68 aaKnown RBP-0.15□□□□□ -2.43
SMD1YGR074W HAP1P0CE41 1502 aa-0.15□□□□□ -2.43
SMD1YGR074W GCN1P33892 2672 aaKnown RBP-0.15□□□□□ -2.43
SMD1YGR074W RRP5Q05022 1729 aaKnown RBP-0.16□□□□□ -2.43
SMD1YGR074W BCK1Q01389 1478 aa-0.16□□□□□ -2.43
SMD1YGR074W RPO31P04051 1460 aa-0.16□□□□□ -2.44
SMD1YGR074W PAI3P01094 68 aa-0.17□□□□□ -2.44
SMD1YGR074W TOR1P35169 2470 aa-0.18□□□□□ -2.44
SMD1YGR074W YPR117WQ06116 2489 aa-0.2□□□□□ -2.44
SMD1YGR074W IQG1Q12280 1495 aa-0.2□□□□□ -2.44
SMD1YGR074W YBR230W-AQ3E762 66 aa-0.2□□□□□ -2.44
SMD1YGR074W SCC2Q04002 1493 aa-0.21□□□□□ -2.44
SMD1YGR074W NUM1Q00402 2748 aa-0.22□□□□□ -2.44
SMD1YGR074W YSY6P38374 65 aa-0.22□□□□□ -2.44
SMD1YGR074W COA2Q3E823 68 aa-0.22□□□□□ -2.44
SMD1YGR074W VMR1P38735 1592 aa-0.23□□□□□ -2.45
SMD1YGR074W RPS30AP0CX33 63 aaKnown RBP-0.23□□□□□ -2.45
SMD1YGR074W RPS30BP0CX34 63 aaKnown RBP-0.23□□□□□ -2.45
SMD1YGR074W RPS27BP38711 82 aa-0.23□□□□□ -2.45
SMD1YGR074W YDR524C-BQ3E6R4 66 aa-0.23□□□□□ -2.45
SMD1YGR074W DNF1P32660 1571 aa-0.23□□□□□ -2.45
SMD1YGR074W VPS15P22219 1454 aa-0.24□□□□□ -2.45
SMD1YGR074W PDR12Q02785 1511 aa-0.25□□□□□ -2.45
SMD1YGR074W TCB3Q03640 1545 aaKnown RBP-0.26□□□□□ -2.45
SMD1YGR074W YGR146C-AQ8TGT9 53 aa-0.27□□□□□ -2.45
SMD1YGR074W YOL131WQ08270 108 aa-0.28□□□□□ -2.45
SMD1YGR074W MYO4P32492 1471 aa-0.29□□□□□ -2.46
SMD1YGR074W YIL102C-AQ2V2P5 75 aa-0.3□□□□□ -2.46
SMD1YGR074W YOL166W-AQ8TGJ1 51 aa-0.3□□□□□ -2.46
SMD1YGR074W CSF1Q12150 2958 aa-0.3□□□□□ -2.46
SMD1YGR074W YLR157W-DP0CE99 70 aa-0.31□□□□□ -2.46
SMD1YGR074W TEL1P38110 2787 aa-0.32□□□□□ -2.46
SMD1YGR074W PDR15Q04182 1529 aaKnown RBP-0.32□□□□□ -2.46
SMD1YGR074W TY1B-DR4Q07793 1604 aa-0.35□□□□□ -2.46
SMD1YGR074W MEC1P38111 2368 aa-0.35□□□□□ -2.47
SMD1YGR074W YGL258W-AQ3E740 77 aa-0.35□□□□□ -2.47
SMD1YGR074W YLL006W-AQ3E814 58 aa-0.35□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms