RNA–Protein interactions for RNA: YGL029W

CGR1, Protein involved in nucleolar integrity and processing of pre-rRNA, yeastyeast

Gene CGR1, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CGR1YGL029W TY1B-ER2Q03619 1755 aa1.32□□□□□ -2.2
CGR1YGL029W TY1B-LR1Q12088 1755 aaKnown RBP1.32□□□□□ -2.2
CGR1YGL029W YBR201C-AQ2V2Q3 67 aa1.32□□□□□ -2.2
CGR1YGL029W TY1B-DR3Q99231 1755 aa1.31□□□□□ -2.2
CGR1YGL029W MMS22Q06164 1454 aa1.31□□□□□ -2.2
CGR1YGL029W YHR214C-DP0CX93 97 aa1.31□□□□□ -2.2
CGR1YGL029W NOP10Q6Q547 58 aaPredicted RBP1.3□□□□□ -2.2
CGR1YGL029W RPC10P40422 70 aa1.29□□□□□ -2.2
CGR1YGL029W YOR105WQ08504 108 aa1.29□□□□□ -2.2
CGR1YGL029W YIL156W-BQ2V2P4 73 aa1.29□□□□□ -2.2
CGR1YGL029W MYO4P32492 1471 aa1.29□□□□□ -2.2
CGR1YGL029W BUD3P25558 1636 aa1.29□□□□□ -2.2
CGR1YGL029W GCN2P15442 1659 aa1.29□□□□□ -2.2
CGR1YGL029W YBT1P32386 1661 aa1.29□□□□□ -2.2
CGR1YGL029W TOM6P33448 61 aa1.28□□□□□ -2.2
CGR1YGL029W LSM2P38203 95 aaKnown RBP1.28□□□□□ -2.2
CGR1YGL029W YDR381C-AQ3E6R5 114 aa1.28□□□□□ -2.2
CGR1YGL029W YMR122W-AQ3E842 84 aa1.28□□□□□ -2.2
CGR1YGL029W NUM1Q00402 2748 aa1.28□□□□□ -2.2
CGR1YGL029W IML1P47170 1584 aa1.27□□□□□ -2.21
CGR1YGL029W HAP1P0CE41 1502 aa1.27□□□□□ -2.21
CGR1YGL029W VTH1P40438 1549 aa1.27□□□□□ -2.21
CGR1YGL029W VTH2P40890 1549 aa1.27□□□□□ -2.21
CGR1YGL029W YAL065CO13511 128 aa1.27□□□□□ -2.21
CGR1YGL029W YOL164W-AQ3E7A5 60 aa1.27□□□□□ -2.21
CGR1YGL029W NUP188P52593 1655 aaKnown RBP1.26□□□□□ -2.21
CGR1YGL029W TY3B-GQ99315 1547 aa1.26□□□□□ -2.21
CGR1YGL029W IQG1Q12280 1495 aa1.26□□□□□ -2.21
CGR1YGL029W STU1P38198 1513 aa1.25□□□□□ -2.21
CGR1YGL029W BCK1Q01389 1478 aa1.25□□□□□ -2.21
CGR1YGL029W YPR117WQ06116 2489 aa1.25□□□□□ -2.21
CGR1YGL029W COX7P10174 60 aa1.25□□□□□ -2.21
CGR1YGL029W TOR1P35169 2470 aa1.25□□□□□ -2.21
CGR1YGL029W VMR1P38735 1592 aa1.24□□□□□ -2.21
CGR1YGL029W HKR1P41809 1802 aa1.24□□□□□ -2.21
CGR1YGL029W ATP18P81450 59 aa1.23□□□□□ -2.21
CGR1YGL029W YOR314WQ12506 109 aa1.23□□□□□ -2.21
CGR1YGL029W YHR213W-AQ8TGT4 77 aa1.23□□□□□ -2.21
CGR1YGL029W PDR12Q02785 1511 aa1.23□□□□□ -2.21
CGR1YGL029W YJR107C-AP0CT86 78 aa1.22□□□□□ -2.21
CGR1YGL029W RPL38P49167 78 aaKnown RBP1.22□□□□□ -2.21
CGR1YGL029W YDR119W-AQ2V2P9 66 aa1.22□□□□□ -2.21
CGR1YGL029W TOM1Q03280 3268 aa1.21□□□□□ -2.21
CGR1YGL029W PMD1P32634 1753 aa1.21□□□□□ -2.22
CGR1YGL029W SNQ2P32568 1501 aaKnown RBP1.21□□□□□ -2.22
CGR1YGL029W PDR5P33302 1511 aaKnown RBP1.21□□□□□ -2.22
CGR1YGL029W YNL190WP53872 204 aa1.21□□□□□ -2.22
CGR1YGL029W SGF11Q03067 99 aa1.21□□□□□ -2.22
CGR1YGL029W YKL065W-AQ2V2P2 73 aa1.21□□□□□ -2.22
CGR1YGL029W RRP5Q05022 1729 aaKnown RBP1.2□□□□□ -2.22
CGR1YGL029W YNL198CP40166 100 aa1.19□□□□□ -2.22
CGR1YGL029W SMC4Q12267 1418 aa1.19□□□□□ -2.22
CGR1YGL029W SDH6Q3E785 79 aa1.19□□□□□ -2.22
CGR1YGL029W PRP8P33334 2413 aaKnown RBP1.19□□□□□ -2.22
CGR1YGL029W YDL022C-AP0C5L6 82 aa1.18□□□□□ -2.22
CGR1YGL029W CUP1-1P0CX80 61 aa1.18□□□□□ -2.22
CGR1YGL029W CUP1-2P0CX81 61 aa1.18□□□□□ -2.22
CGR1YGL029W SWM2P40342 146 aa1.18□□□□□ -2.22
CGR1YGL029W YGR121W-AQ3E816 71 aa1.18□□□□□ -2.22
CGR1YGL029W QCR9P22289 66 aa1.17□□□□□ -2.22
CGR1YGL029W TIM12P32830 109 aa1.17□□□□□ -2.22
CGR1YGL029W APC1P53886 1748 aa1.17□□□□□ -2.22
CGR1YGL029W BPH1P25356 2167 aa1.17□□□□□ -2.22
CGR1YGL029W FKS3Q04952 1785 aa1.15□□□□□ -2.23
CGR1YGL029W PAI3P01094 68 aa1.14□□□□□ -2.23
CGR1YGL029W YPR108W-AQ3E7B3 70 aa1.13□□□□□ -2.23
CGR1YGL029W TOR2P32600 2474 aaKnown RBP1.13□□□□□ -2.23
CGR1YGL029W VPS13Q07878 3144 aa1.12□□□□□ -2.23
CGR1YGL029W YKL018C-AQ3E7A7 99 aa1.11□□□□□ -2.23
CGR1YGL029W YGR035W-AQ45U48 73 aa1.11□□□□□ -2.23
CGR1YGL029W YOR032W-AQ8TGS1 66 aa1.11□□□□□ -2.23
CGR1YGL029W TAO3P40468 2376 aa1.1□□□□□ -2.23
CGR1YGL029W FIG2P25653 1609 aa1.09□□□□□ -2.23
CGR1YGL029W YFR009W-AP0C5M9 85 aa1.09□□□□□ -2.23
CGR1YGL029W ATX1P38636 73 aa1.09□□□□□ -2.23
CGR1YGL029W YOL097W-AQ3E7Y9 61 aa1.09□□□□□ -2.23
CGR1YGL029W YIL134C-AQ45U18 67 aa1.09□□□□□ -2.23
CGR1YGL029W NUP192P47054 1683 aa1.09□□□□□ -2.24
CGR1YGL029W GCN1P33892 2672 aaKnown RBP1.07□□□□□ -2.24
CGR1YGL029W TEL1P38110 2787 aa1.06□□□□□ -2.24
CGR1YGL029W UTP20P35194 2493 aaKnown RBP1.06□□□□□ -2.24
CGR1YGL029W ATP17Q06405 101 aa1.05□□□□□ -2.24
CGR1YGL029W YFL041W-AQ3E817 63 aa1.05□□□□□ -2.24
CGR1YGL029W SSS1P35179 80 aa1.04□□□□□ -2.24
CGR1YGL029W YBR016WP38216 128 aa1.04□□□□□ -2.24
CGR1YGL029W YBR032WP38223 100 aa1.04□□□□□ -2.24
CGR1YGL029W PAU7P39545 55 aa1.04□□□□□ -2.24
CGR1YGL029W RPS29BP41058 56 aaKnown RBP1.04□□□□□ -2.24
CGR1YGL029W ERI1P62651 68 aaKnown RBP1.02□□□□□ -2.25
CGR1YGL029W YDR034W-BQ6Q5X2 51 aa1.02□□□□□ -2.25
CGR1YGL029W FMP27Q06179 2628 aa1.02□□□□□ -2.25
CGR1YGL029W YLR146W-AQ2V2P1 62 aa1□□□□□ -2.25
CGR1YGL029W FLO1P32768 1537 aa0.99□□□□□ -2.25
CGR1YGL029W SEN1Q00416 2231 aaKnown RBP0.99□□□□□ -2.25
CGR1YGL029W SPI1P40092 148 aa0.98□□□□□ -2.25
CGR1YGL029W EDC1P53080 175 aaPredicted RBP0.98□□□□□ -2.25
CGR1YGL029W IRA1P18963 3092 aa0.96□□□□□ -2.26
CGR1YGL029W YSY6P38374 65 aa0.93□□□□□ -2.26
CGR1YGL029W YOL131WQ08270 108 aa0.93□□□□□ -2.26
CGR1YGL029W IRA2P19158 3079 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms