RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	SPO14	P36126	1683 aa		3.32	□□□□□ -1.88
YDR261C-D	YDR261C-D	RIM15	P43565	1770 aa		3.32	□□□□□ -1.88
YDR261C-D	YDR261C-D	TAR1	Q8TGM6	124 aa		3.31	□□□□□ -1.88
YDR261C-D	YDR261C-D	YJR085C	P47131	105 aa	Known RBP	3.3	□□□□□ -1.88
YDR261C-D	YDR261C-D	MRP10	O75012	95 aa		3.3	□□□□□ -1.88
YDR261C-D	YDR261C-D	YJL144W	P47009	104 aa		3.3	□□□□□ -1.88
YDR261C-D	YDR261C-D	YBR072C-A	Q3E794	53 aa		3.3	□□□□□ -1.88
YDR261C-D	YDR261C-D	YJL197C-A	P0C5P0	93 aa		3.3	□□□□□ -1.88
YDR261C-D	YDR261C-D	HHY1	P39982	102 aa		3.28	□□□□□ -1.88
YDR261C-D	YDR261C-D	YER084W	P40057	128 aa		3.28	□□□□□ -1.88
YDR261C-D	YDR261C-D	RPC10	P40422	70 aa		3.28	□□□□□ -1.88
YDR261C-D	YDR261C-D	YIL177C	P40434	1758 aa		3.28	□□□□□ -1.88
YDR261C-D	YDR261C-D	YJL225C	P40889	1758 aa		3.28	□□□□□ -1.88
YDR261C-D	YDR261C-D	YAL067W-A	Q8TGK6	75 aa		3.28	□□□□□ -1.88
YDR261C-D	YDR261C-D	YOR394C-A	Q8TGJ0	55 aa		3.27	□□□□□ -1.89
YDR261C-D	YDR261C-D	SEC7	P11075	2009 aa	Known RBP	3.27	□□□□□ -1.89
YDR261C-D	YDR261C-D	CYR1	P08678	2026 aa	Known RBP	3.26	□□□□□ -1.89
YDR261C-D	YDR261C-D	MRPS12	P53732	153 aa		3.26	□□□□□ -1.89
YDR261C-D	YDR261C-D	YDR524C-B	Q3E6R4	66 aa		3.26	□□□□□ -1.89
YDR261C-D	YDR261C-D	UTP10	P42945	1769 aa	Known RBP	3.25	□□□□□ -1.89
YDR261C-D	YDR261C-D	TY4B-J	P47024	1803 aa		3.25	□□□□□ -1.89
YDR261C-D	YDR261C-D	YKL097C	P34245	136 aa		3.25	□□□□□ -1.89
YDR261C-D	YDR261C-D	YML054C-A	Q3E809	52 aa		3.24	□□□□□ -1.89
YDR261C-D	YDR261C-D	AUA1	P32450	94 aa		3.24	□□□□□ -1.89
YDR261C-D	YDR261C-D	YGR146C-A	Q8TGT9	53 aa		3.24	□□□□□ -1.89
YDR261C-D	YDR261C-D	YDR115W	Q04598	105 aa		3.23	□□□□□ -1.89
YDR261C-D	YDR261C-D	TY1B-NL2	Q99337	1749 aa	Known RBP	3.23	□□□□□ -1.89
YDR261C-D	YDR261C-D	YOR316C-A	Q3E806	69 aa		3.23	□□□□□ -1.89
YDR261C-D	YDR261C-D	YOL166W-A	Q8TGJ1	51 aa		3.22	□□□□□ -1.89
YDR261C-D	YDR261C-D	FPR1	P20081	114 aa	Known RBP	3.22	□□□□□ -1.89
YDR261C-D	YDR261C-D	YRF1-3	P0CX14	1859 aa		3.21	□□□□□ -1.89
YDR261C-D	YDR261C-D	YRF1-7	P0CX15	1859 aa		3.21	□□□□□ -1.89
YDR261C-D	YDR261C-D	YRF1-6	P53819	1859 aa		3.21	□□□□□ -1.89
YDR261C-D	YDR261C-D	FLO1	P32768	1537 aa		3.21	□□□□□ -1.9
YDR261C-D	YDR261C-D	YRF1-1	P0CX20	1796 aa		3.21	□□□□□ -1.9
YDR261C-D	YDR261C-D	YRF1-5	P0CX21	1796 aa		3.21	□□□□□ -1.9
YDR261C-D	YDR261C-D	YRF1-8	P0CX22	1796 aa		3.21	□□□□□ -1.9
YDR261C-D	YDR261C-D	CMC4	Q3E7A9	73 aa		3.21	□□□□□ -1.9
YDR261C-D	YDR261C-D	BPH1	P25356	2167 aa		3.2	□□□□□ -1.9
YDR261C-D	YDR261C-D	LAA1	P39526	2014 aa		3.2	□□□□□ -1.9
YDR261C-D	YDR261C-D	YJL027C	P47063	138 aa	Predicted RBP	3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-H	O13535	1793 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-DR5	P0C2I2	1755 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-DR6	P0C2I3	1755 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-LR2	P0C2I5	1755 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-PR2	P0C2J0	1756 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-JR1	P47098	1755 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-ML2	Q03434	1755 aa	Known RBP	3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-ER1	Q03612	1755 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-ML1	Q04711	1755 aa	Known RBP	3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-GR2	Q12269	1755 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-OL	Q12273	1755 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-PL	Q12414	1755 aa	Known RBP	3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	YMR105W-A	Q8TGS8	64 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	YER145C-A	A0A023PYF4	145 aa		3.19	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY4B-H	P0C2J7	1802 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-LR1	P0C2J3	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-F	P0CX63	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-GR2	P0CX64	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-C	P25384	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-DR2	Q03494	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-DR1	Q03855	1755 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-DR3	Q07791	1770 aa	Known RBP	3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-OR1	Q12113	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-DR1	Q12472	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-B	Q12491	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY2B-OR2	Q12501	1770 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-DR3	Q99231	1755 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	YJR128W	P47162	119 aa		3.18	□□□□□ -1.9
YDR261C-D	YDR261C-D	YDR034C-A	P0C289	58 aa		3.16	□□□□□ -1.9
YDR261C-D	YDR261C-D	YHR032W-A	P0C5N6	59 aa		3.15	□□□□□ -1.9
YDR261C-D	YDR261C-D	TY1B-JR2	P47100	1755 aa	Known RBP	3.15	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-GR1	Q12141	1755 aa		3.15	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-MR1	Q04214	1755 aa		3.15	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-BR	Q12193	1756 aa		3.15	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-BL	Q12490	1755 aa		3.15	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-OR	Q92393	1755 aa		3.15	□□□□□ -1.91
YDR261C-D	YDR261C-D	FKS1	P38631	1876 aa	Known RBP	3.14	□□□□□ -1.91
YDR261C-D	YDR261C-D	YLR255C	O13574	117 aa		3.14	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-ER2	Q03619	1755 aa		3.14	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-MR2	Q04670	1755 aa	Known RBP	3.14	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-LR1	Q12088	1755 aa	Known RBP	3.14	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-NL1	Q12112	1755 aa		3.14	□□□□□ -1.91
YDR261C-D	YDR261C-D	FKS3	Q04952	1785 aa		3.14	□□□□□ -1.91
YDR261C-D	YDR261C-D	CDC39	P25655	2108 aa	Known RBP	3.13	□□□□□ -1.91
YDR261C-D	YDR261C-D	YDR246W-A	Q3E763	66 aa		3.12	□□□□□ -1.91
YDR261C-D	YDR261C-D	UBR2	Q07963	1872 aa		3.1	□□□□□ -1.91
YDR261C-D	YDR261C-D	TY1B-GR3	Q12316	1755 aa		3.1	□□□□□ -1.91
YDR261C-D	YDR261C-D	YHR073W-A	P0C5N7	58 aa		3.09	□□□□□ -1.91
YDR261C-D	YDR261C-D	MOT1	P32333	1867 aa		3.09	□□□□□ -1.91
YDR261C-D	YDR261C-D	BLM10	P43583	2143 aa		3.09	□□□□□ -1.91
YDR261C-D	YDR261C-D	APC1	P53886	1748 aa		3.08	□□□□□ -1.92
YDR261C-D	YDR261C-D	YLR422W	Q06409	1932 aa		3.08	□□□□□ -1.92
YDR261C-D	YDR261C-D	YPR195C	Q06594	109 aa		3.07	□□□□□ -1.92
YDR261C-D	YDR261C-D	GLT1	Q12680	2145 aa	Known RBP	3.07	□□□□□ -1.92
YDR261C-D	YDR261C-D	POL2	P21951	2222 aa	Known RBP	3.06	□□□□□ -1.92
YDR261C-D	YDR261C-D	DUR1,2	P32528	1835 aa	Known RBP	3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms