RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C UTP10P42945 1769 aaKnown RBP2.52□□□□□ -2.01
MSS116YDR194C YDL022C-AP0C5L6 82 aa2.5□□□□□ -2.01
MSS116YDR194C TY2B-CP25384 1770 aa2.5□□□□□ -2.01
MSS116YDR194C TY2B-DR1Q12472 1770 aa2.5□□□□□ -2.01
MSS116YDR194C SGF11Q03067 99 aa2.5□□□□□ -2.01
MSS116YDR194C YIL102C-AQ2V2P5 75 aa2.5□□□□□ -2.01
MSS116YDR194C TY1B-DR4Q07793 1604 aa2.5□□□□□ -2.01
MSS116YDR194C STT4P37297 1900 aa2.5□□□□□ -2.01
MSS116YDR194C YSY6P38374 65 aa2.49□□□□□ -2.01
MSS116YDR194C ATP17Q06405 101 aa2.49□□□□□ -2.01
MSS116YDR194C ERI1P62651 68 aaKnown RBP2.48□□□□□ -2.01
MSS116YDR194C RPL38P49167 78 aaKnown RBP2.47□□□□□ -2.01
MSS116YDR194C FKS3Q04952 1785 aa2.46□□□□□ -2.02
MSS116YDR194C CUP1-1P0CX80 61 aa2.46□□□□□ -2.02
MSS116YDR194C CUP1-2P0CX81 61 aa2.46□□□□□ -2.02
MSS116YDR194C CDC25P04821 1589 aa2.45□□□□□ -2.02
MSS116YDR194C PDR5P33302 1511 aaKnown RBP2.45□□□□□ -2.02
MSS116YDR194C PDR15Q04182 1529 aaKnown RBP2.45□□□□□ -2.02
MSS116YDR194C YDR246W-AQ3E763 66 aa2.44□□□□□ -2.02
MSS116YDR194C YIL134C-AQ45U18 67 aa2.43□□□□□ -2.02
MSS116YDR194C SDH6Q3E785 79 aa2.43□□□□□ -2.02
MSS116YDR194C YLR307C-AQ3E825 87 aa2.43□□□□□ -2.02
MSS116YDR194C HIR3P47171 1648 aa2.43□□□□□ -2.02
MSS116YDR194C DNF2Q12675 1612 aa2.42□□□□□ -2.02
MSS116YDR194C TY1B-JR2P47100 1755 aaKnown RBP2.42□□□□□ -2.02
MSS116YDR194C TY1B-MR1Q04214 1755 aa2.42□□□□□ -2.02
MSS116YDR194C TY1B-MR2Q04670 1755 aaKnown RBP2.42□□□□□ -2.02
MSS116YDR194C TY1B-NL1Q12112 1755 aa2.42□□□□□ -2.02
MSS116YDR194C TY1B-GR1Q12141 1755 aa2.42□□□□□ -2.02
MSS116YDR194C TY1B-BLQ12490 1755 aa2.42□□□□□ -2.02
MSS116YDR194C YDR182W-AQ3E796 67 aa2.41□□□□□ -2.02
MSS116YDR194C YLR157W-EP0CF00 54 aa2.41□□□□□ -2.02
MSS116YDR194C TY2B-LR1P0C2J3 1770 aa2.41□□□□□ -2.02
MSS116YDR194C TY2B-FP0CX63 1770 aa2.41□□□□□ -2.02
MSS116YDR194C TY2B-GR2P0CX64 1770 aa2.41□□□□□ -2.02
MSS116YDR194C TY2B-DR2Q03494 1770 aa2.41□□□□□ -2.02
MSS116YDR194C TY2B-OR1Q12113 1770 aa2.41□□□□□ -2.02
MSS116YDR194C TY2B-BQ12491 1770 aa2.41□□□□□ -2.02
MSS116YDR194C TY2B-OR2Q12501 1770 aa2.41□□□□□ -2.02
MSS116YDR194C BCK1Q01389 1478 aa2.41□□□□□ -2.02
MSS116YDR194C RPL37BP51402 88 aaKnown RBP2.4□□□□□ -2.02
MSS116YDR194C ARO1P08566 1588 aaKnown RBP2.4□□□□□ -2.03
MSS116YDR194C YCF1P39109 1515 aaKnown RBP2.4□□□□□ -2.03
MSS116YDR194C HUB1Q6Q546 73 aa2.4□□□□□ -2.03
MSS116YDR194C YOR032W-AQ8TGS1 66 aa2.39□□□□□ -2.03
MSS116YDR194C TY2B-DR3Q07791 1770 aaKnown RBP2.39□□□□□ -2.03
MSS116YDR194C THO2P53552 1597 aaKnown RBP2.38□□□□□ -2.03
MSS116YDR194C RPO21P04050 1733 aaKnown RBP2.38□□□□□ -2.03
MSS116YDR194C RPC10P40422 70 aa2.38□□□□□ -2.03
MSS116YDR194C YKL018C-AQ3E7A7 99 aa2.38□□□□□ -2.03
MSS116YDR194C YPR108W-AQ3E7B3 70 aa2.38□□□□□ -2.03
MSS116YDR194C TY3B-GQ99315 1547 aa2.37□□□□□ -2.03
MSS116YDR194C TY1B-ER2Q03619 1755 aa2.37□□□□□ -2.03
MSS116YDR194C TY1B-LR1Q12088 1755 aaKnown RBP2.37□□□□□ -2.03
MSS116YDR194C RIM15P43565 1770 aa2.37□□□□□ -2.03
MSS116YDR194C YBR032WP38223 100 aa2.37□□□□□ -2.03
MSS116YDR194C APC1P53886 1748 aa2.37□□□□□ -2.03
MSS116YDR194C BPH1P25356 2167 aa2.36□□□□□ -2.03
MSS116YDR194C SNQ2P32568 1501 aaKnown RBP2.34□□□□□ -2.03
MSS116YDR194C BLM10P43583 2143 aa2.34□□□□□ -2.03
MSS116YDR194C SPO14P36126 1683 aa2.33□□□□□ -2.04
MSS116YDR194C PEP1P32319 1579 aa2.33□□□□□ -2.04
MSS116YDR194C YKL023C-AQ2V2P3 75 aa2.33□□□□□ -2.04
MSS116YDR194C SPT6P23615 1451 aaKnown RBP2.32□□□□□ -2.04
MSS116YDR194C YNL190WP53872 204 aa2.31□□□□□ -2.04
MSS116YDR194C EDC1P53080 175 aaPredicted RBP2.3□□□□□ -2.04
MSS116YDR194C YJR107C-AP0CT86 78 aa2.29□□□□□ -2.04
MSS116YDR194C VTH1P40438 1549 aa2.28□□□□□ -2.04
MSS116YDR194C VTH2P40890 1549 aa2.28□□□□□ -2.04
MSS116YDR194C RPS30AP0CX33 63 aaKnown RBP2.27□□□□□ -2.05
MSS116YDR194C RPS30BP0CX34 63 aaKnown RBP2.27□□□□□ -2.05
MSS116YDR194C YOL164W-AQ3E7A5 60 aa2.27□□□□□ -2.05
MSS116YDR194C VMR1P38735 1592 aa2.26□□□□□ -2.05
MSS116YDR194C YLR146W-AQ2V2P1 62 aa2.25□□□□□ -2.05
MSS116YDR194C GCN1P33892 2672 aaKnown RBP2.23□□□□□ -2.05
MSS116YDR194C YOR011W-AQ3E807 68 aa2.21□□□□□ -2.05
MSS116YDR194C SSK2P53599 1579 aa2.21□□□□□ -2.06
MSS116YDR194C YOL166W-AQ8TGJ1 51 aa2.2□□□□□ -2.06
MSS116YDR194C YBL039W-BP0C268 59 aa2.19□□□□□ -2.06
MSS116YDR194C YBR200W-AQ3E755 54 aa2.19□□□□□ -2.06
MSS116YDR194C SNF2P22082 1703 aa2.19□□□□□ -2.06
MSS116YDR194C HKR1P41809 1802 aa2.18□□□□□ -2.06
MSS116YDR194C HAP1P0CE41 1502 aa2.18□□□□□ -2.06
MSS116YDR194C PRP8P33334 2413 aaKnown RBP2.16□□□□□ -2.06
MSS116YDR194C TOM1Q03280 3268 aa2.16□□□□□ -2.06
MSS116YDR194C YBT1P32386 1661 aa2.14□□□□□ -2.07
MSS116YDR194C UTP20P35194 2493 aaKnown RBP2.13□□□□□ -2.07
MSS116YDR194C OLI1P61829 76 aa2.12□□□□□ -2.07
MSS116YDR194C TAO3P40468 2376 aa2.12□□□□□ -2.07
MSS116YDR194C YOR394C-AQ8TGJ0 55 aa2.12□□□□□ -2.07
MSS116YDR194C YMR001C-AQ8TGS9 76 aa2.12□□□□□ -2.07
MSS116YDR194C RKR1Q04781 1562 aa2.12□□□□□ -2.07
MSS116YDR194C TEL1P38110 2787 aa2.08□□□□□ -2.08
MSS116YDR194C YBR016WP38216 128 aa2.07□□□□□ -2.08
MSS116YDR194C NUP188P52593 1655 aaKnown RBP2.07□□□□□ -2.08
MSS116YDR194C YLR157W-DP0CE99 70 aa2.07□□□□□ -2.08
MSS116YDR194C RPS27AP35997 82 aaKnown RBP2.06□□□□□ -2.08
MSS116YDR194C ULS1Q08562 1619 aa2.05□□□□□ -2.08
MSS116YDR194C YGR025WP53216 100 aa2.05□□□□□ -2.08
MSS116YDR194C YFR009W-AP0C5M9 85 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms