RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF11, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF11YDR073W SCC2Q04002 1493 aa1.94□□□□□ -2.1
SNF11YDR073W BLM10P43583 2143 aa1.94□□□□□ -2.1
SNF11YDR073W YPR108W-AQ3E7B3 70 aa1.94□□□□□ -2.1
SNF11YDR073W APC1P53886 1748 aa1.93□□□□□ -2.1
SNF11YDR073W PMD1P32634 1753 aa1.93□□□□□ -2.1
SNF11YDR073W HKR1P41809 1802 aa1.92□□□□□ -2.1
SNF11YDR073W TY2B-LR1P0C2J3 1770 aa1.91□□□□□ -2.1
SNF11YDR073W TY2B-FP0CX63 1770 aa1.91□□□□□ -2.1
SNF11YDR073W TY2B-GR2P0CX64 1770 aa1.91□□□□□ -2.1
SNF11YDR073W TY2B-DR2Q03494 1770 aa1.91□□□□□ -2.1
SNF11YDR073W TY2B-OR1Q12113 1770 aa1.91□□□□□ -2.1
SNF11YDR073W TY2B-BQ12491 1770 aa1.91□□□□□ -2.1
SNF11YDR073W TY2B-OR2Q12501 1770 aa1.91□□□□□ -2.1
SNF11YDR073W YBR032WP38223 100 aa1.91□□□□□ -2.1
SNF11YDR073W ATP17Q06405 101 aa1.9□□□□□ -2.11
SNF11YDR073W PAU7P39545 55 aa1.89□□□□□ -2.11
SNF11YDR073W TY2B-DR3Q07791 1770 aaKnown RBP1.89□□□□□ -2.11
SNF11YDR073W SSS1P35179 80 aa1.88□□□□□ -2.11
SNF11YDR073W SPI1P40092 148 aa1.88□□□□□ -2.11
SNF11YDR073W DNF1P32660 1571 aa1.87□□□□□ -2.11
SNF11YDR073W IML1P47170 1584 aa1.86□□□□□ -2.11
SNF11YDR073W RPS29BP41058 56 aaKnown RBP1.86□□□□□ -2.11
SNF11YDR073W EDC1P53080 175 aaPredicted RBP1.86□□□□□ -2.11
SNF11YDR073W YOR032W-AQ8TGS1 66 aa1.83□□□□□ -2.12
SNF11YDR073W ARO1P08566 1588 aaKnown RBP1.82□□□□□ -2.12
SNF11YDR073W ERI1P62651 68 aaKnown RBP1.82□□□□□ -2.12
SNF11YDR073W RRP5Q05022 1729 aaKnown RBP1.82□□□□□ -2.12
SNF11YDR073W VPS15P22219 1454 aa1.82□□□□□ -2.12
SNF11YDR073W YBR016WP38216 128 aa1.81□□□□□ -2.12
SNF11YDR073W YKL018C-AQ3E7A7 99 aa1.81□□□□□ -2.12
SNF11YDR073W PRP8P33334 2413 aaKnown RBP1.8□□□□□ -2.12
SNF11YDR073W YFR009W-AP0C5M9 85 aa1.79□□□□□ -2.12
SNF11YDR073W RPO31P04051 1460 aa1.79□□□□□ -2.12
SNF11YDR073W IQG1Q12280 1495 aa1.79□□□□□ -2.12
SNF11YDR073W MYO4P32492 1471 aa1.78□□□□□ -2.12
SNF11YDR073W FKS3Q04952 1785 aa1.77□□□□□ -2.13
SNF11YDR073W BPH1P25356 2167 aa1.76□□□□□ -2.13
SNF11YDR073W DNF2Q12675 1612 aa1.74□□□□□ -2.13
SNF11YDR073W YIL134C-AQ45U18 67 aa1.74□□□□□ -2.13
SNF11YDR073W YDR246W-AQ3E763 66 aa1.73□□□□□ -2.13
SNF11YDR073W YSY6P38374 65 aa1.71□□□□□ -2.14
SNF11YDR073W YOL131WQ08270 108 aa1.7□□□□□ -2.14
SNF11YDR073W YLR146W-AQ2V2P1 62 aa1.7□□□□□ -2.14
SNF11YDR073W SMC4Q12267 1418 aa1.69□□□□□ -2.14
SNF11YDR073W HUB1Q6Q546 73 aa1.69□□□□□ -2.14
SNF11YDR073W YIL102C-AQ2V2P5 75 aa1.67□□□□□ -2.14
SNF11YDR073W KOG1P38873 1557 aa1.67□□□□□ -2.14
SNF11YDR073W YDR182W-AQ3E796 67 aa1.66□□□□□ -2.14
SNF11YDR073W YFR010W-AP0C5N0 62 aa1.65□□□□□ -2.15
SNF11YDR073W YGR025WP53216 100 aa1.64□□□□□ -2.15
SNF11YDR073W YBR200W-AQ3E755 54 aa1.62□□□□□ -2.15
SNF11YDR073W BCK1Q01389 1478 aa1.62□□□□□ -2.15
SNF11YDR073W PDR12Q02785 1511 aa1.61□□□□□ -2.15
SNF11YDR073W IRC20Q06554 1556 aa1.61□□□□□ -2.15
SNF11YDR073W YOR011W-AQ3E807 68 aa1.61□□□□□ -2.15
SNF11YDR073W YBL039W-BP0C268 59 aa1.6□□□□□ -2.15
SNF11YDR073W VMA9Q3E7B6 73 aa1.6□□□□□ -2.15
SNF11YDR073W TY3B-GQ99315 1547 aa1.6□□□□□ -2.15
SNF11YDR073W RPS30AP0CX33 63 aaKnown RBP1.57□□□□□ -2.16
SNF11YDR073W RPS30BP0CX34 63 aaKnown RBP1.57□□□□□ -2.16
SNF11YDR073W RPS27AP35997 82 aaKnown RBP1.56□□□□□ -2.16
SNF11YDR073W YBL044WP38194 122 aa1.56□□□□□ -2.16
SNF11YDR073W OLI1P61829 76 aa1.56□□□□□ -2.16
SNF11YDR073W YOR394C-AQ8TGJ0 55 aa1.56□□□□□ -2.16
SNF11YDR073W RPO21P04050 1733 aaKnown RBP1.56□□□□□ -2.16
SNF11YDR073W VMR1P38735 1592 aa1.55□□□□□ -2.16
SNF11YDR073W MMS1Q06211 1407 aa1.54□□□□□ -2.16
SNF11YDR073W SPO14P36126 1683 aa1.48□□□□□ -2.17
SNF11YDR073W HAP1P0CE41 1502 aa1.45□□□□□ -2.18
SNF11YDR073W YOL166W-AQ8TGJ1 51 aa1.44□□□□□ -2.18
SNF11YDR073W PDR5P33302 1511 aaKnown RBP1.41□□□□□ -2.18
SNF11YDR073W VTH1P40438 1549 aa1.41□□□□□ -2.18
SNF11YDR073W VTH2P40890 1549 aa1.41□□□□□ -2.18
SNF11YDR073W SEN1Q00416 2231 aaKnown RBP1.4□□□□□ -2.18
SNF11YDR073W YMR001C-AQ8TGS9 76 aa1.38□□□□□ -2.19
SNF11YDR073W PDR15Q04182 1529 aaKnown RBP1.38□□□□□ -2.19
SNF11YDR073W YCR108CQ3E819 63 aa1.37□□□□□ -2.19
SNF11YDR073W TAO3P40468 2376 aa1.35□□□□□ -2.19
SNF11YDR073W SIP18P50263 79 aa1.34□□□□□ -2.19
SNF11YDR073W YKL023C-AQ2V2P3 75 aa1.34□□□□□ -2.19
SNF11YDR073W YLR157W-DP0CE99 70 aa1.33□□□□□ -2.2
SNF11YDR073W YCF1P39109 1515 aaKnown RBP1.3□□□□□ -2.2
SNF11YDR073W CDC25P04821 1589 aa1.29□□□□□ -2.2
SNF11YDR073W YOR008C-AQ3E7B9 74 aa1.28□□□□□ -2.2
SNF11YDR073W YBT1P32386 1661 aa1.27□□□□□ -2.21
SNF11YDR073W MON2P48563 1636 aaPredicted RBP1.27□□□□□ -2.21
SNF11YDR073W TY1B-DR4Q07793 1604 aa1.27□□□□□ -2.21
SNF11YDR073W YBR230W-AQ3E762 66 aa1.27□□□□□ -2.21
SNF11YDR073W SPT6P23615 1451 aaKnown RBP1.24□□□□□ -2.21
SNF11YDR073W RPS27BP38711 82 aa1.22□□□□□ -2.21
SNF11YDR073W SNQ2P32568 1501 aaKnown RBP1.21□□□□□ -2.22
SNF11YDR073W TOS6P48560 102 aa1.18□□□□□ -2.22
SNF11YDR073W NUP188P52593 1655 aaKnown RBP1.16□□□□□ -2.22
SNF11YDR073W YOR192C-CQ3E736 78 aa1.15□□□□□ -2.23
SNF11YDR073W SSK2P53599 1579 aa1.15□□□□□ -2.23
SNF11YDR073W YOR093CQ12275 1648 aa1.12□□□□□ -2.23
SNF11YDR073W YGR146C-AQ8TGT9 53 aa1.08□□□□□ -2.24
SNF11YDR073W USO1P25386 1790 aa1.02□□□□□ -2.25
SNF11YDR073W RPS29AP41057 56 aaKnown RBP1.02□□□□□ -2.25
SNF11YDR073W ULS1Q08562 1619 aa0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms