RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C PAU7P39545 55 aa0.53□□□□□ -2.32
ASM4YDL088C TY2B-CP25384 1770 aa0.53□□□□□ -2.32
ASM4YDL088C TY2B-DR1Q12472 1770 aa0.53□□□□□ -2.32
ASM4YDL088C ATP17Q06405 101 aa0.53□□□□□ -2.33
ASM4YDL088C TY1B-JR1P47098 1755 aa0.52□□□□□ -2.33
ASM4YDL088C TY1B-ML2Q03434 1755 aaKnown RBP0.52□□□□□ -2.33
ASM4YDL088C TY1B-ER1Q03612 1755 aa0.52□□□□□ -2.33
ASM4YDL088C TY1B-OLQ12273 1755 aa0.52□□□□□ -2.33
ASM4YDL088C STT4P37297 1900 aa0.52□□□□□ -2.33
ASM4YDL088C YBR016WP38216 128 aa0.52□□□□□ -2.33
ASM4YDL088C YLR146W-AQ2V2P1 62 aa0.52□□□□□ -2.33
ASM4YDL088C UFD4P33202 1483 aa0.52□□□□□ -2.33
ASM4YDL088C SSS1P35179 80 aa0.51□□□□□ -2.33
ASM4YDL088C YFL041W-AQ3E817 63 aa0.51□□□□□ -2.33
ASM4YDL088C YGR035W-AQ45U48 73 aa0.51□□□□□ -2.33
ASM4YDL088C IML1P47170 1584 aa0.5□□□□□ -2.33
ASM4YDL088C SCC2Q04002 1493 aa0.5□□□□□ -2.33
ASM4YDL088C YKL018C-AQ3E7A7 99 aa0.5□□□□□ -2.33
ASM4YDL088C YOR032W-AQ8TGS1 66 aa0.5□□□□□ -2.33
ASM4YDL088C SMC4Q12267 1418 aa0.5□□□□□ -2.33
ASM4YDL088C TY2B-LR1P0C2J3 1770 aa0.49□□□□□ -2.33
ASM4YDL088C TY2B-FP0CX63 1770 aa0.49□□□□□ -2.33
ASM4YDL088C TY2B-GR2P0CX64 1770 aa0.49□□□□□ -2.33
ASM4YDL088C TY2B-DR2Q03494 1770 aa0.49□□□□□ -2.33
ASM4YDL088C TY2B-OR1Q12113 1770 aa0.49□□□□□ -2.33
ASM4YDL088C TY2B-BQ12491 1770 aa0.49□□□□□ -2.33
ASM4YDL088C TY2B-OR2Q12501 1770 aa0.49□□□□□ -2.33
ASM4YDL088C OLI1P61829 76 aa0.49□□□□□ -2.33
ASM4YDL088C HUB1Q6Q546 73 aa0.49□□□□□ -2.33
ASM4YDL088C KOG1P38873 1557 aa0.49□□□□□ -2.33
ASM4YDL088C TCB3Q03640 1545 aaKnown RBP0.49□□□□□ -2.33
ASM4YDL088C SPI1P40092 148 aa0.49□□□□□ -2.33
ASM4YDL088C PMD1P32634 1753 aa0.48□□□□□ -2.33
ASM4YDL088C TY2B-DR3Q07791 1770 aaKnown RBP0.48□□□□□ -2.33
ASM4YDL088C DNF1P32660 1571 aa0.48□□□□□ -2.33
ASM4YDL088C TAO3P40468 2376 aa0.48□□□□□ -2.33
ASM4YDL088C YGR025WP53216 100 aa0.48□□□□□ -2.33
ASM4YDL088C ERI1P62651 68 aaKnown RBP0.48□□□□□ -2.33
ASM4YDL088C IQG1Q12280 1495 aa0.48□□□□□ -2.33
ASM4YDL088C MYO4P32492 1471 aa0.47□□□□□ -2.33
ASM4YDL088C YSY6P38374 65 aa0.46□□□□□ -2.34
ASM4YDL088C MMS1Q06211 1407 aa0.46□□□□□ -2.34
ASM4YDL088C RPO31P04051 1460 aa0.45□□□□□ -2.34
ASM4YDL088C VPS15P22219 1454 aa0.45□□□□□ -2.34
ASM4YDL088C ARO1P08566 1588 aaKnown RBP0.45□□□□□ -2.34
ASM4YDL088C IRC20Q06554 1556 aa0.45□□□□□ -2.34
ASM4YDL088C DNF2Q12675 1612 aa0.45□□□□□ -2.34
ASM4YDL088C TY3B-GQ99315 1547 aa0.45□□□□□ -2.34
ASM4YDL088C BPH1P25356 2167 aa0.45□□□□□ -2.34
ASM4YDL088C YBL039W-BP0C268 59 aa0.45□□□□□ -2.34
ASM4YDL088C YIL102C-AQ2V2P5 75 aa0.45□□□□□ -2.34
ASM4YDL088C YBL044WP38194 122 aa0.44□□□□□ -2.34
ASM4YDL088C SIP18P50263 79 aa0.44□□□□□ -2.34
ASM4YDL088C YBR200W-AQ3E755 54 aa0.44□□□□□ -2.34
ASM4YDL088C YOR394C-AQ8TGJ0 55 aa0.44□□□□□ -2.34
ASM4YDL088C RRP5Q05022 1729 aaKnown RBP0.44□□□□□ -2.34
ASM4YDL088C YOR011W-AQ3E807 68 aa0.43□□□□□ -2.34
ASM4YDL088C RPS30AP0CX33 63 aaKnown RBP0.42□□□□□ -2.34
ASM4YDL088C RPS30BP0CX34 63 aaKnown RBP0.42□□□□□ -2.34
ASM4YDL088C YOL131WQ08270 108 aa0.42□□□□□ -2.34
ASM4YDL088C YDR182W-AQ3E796 67 aa0.42□□□□□ -2.34
ASM4YDL088C VMA9Q3E7B6 73 aa0.42□□□□□ -2.34
ASM4YDL088C YFR010W-AP0C5N0 62 aa0.41□□□□□ -2.34
ASM4YDL088C RPS27AP35997 82 aaKnown RBP0.41□□□□□ -2.34
ASM4YDL088C BCK1Q01389 1478 aa0.41□□□□□ -2.34
ASM4YDL088C YDR246W-AQ3E763 66 aa0.41□□□□□ -2.34
ASM4YDL088C YCR108CQ3E819 63 aa0.41□□□□□ -2.34
ASM4YDL088C YOR008C-AQ3E7B9 74 aa0.4□□□□□ -2.34
ASM4YDL088C VMR1P38735 1592 aa0.4□□□□□ -2.35
ASM4YDL088C SEN1Q00416 2231 aaKnown RBP0.4□□□□□ -2.35
ASM4YDL088C FKS3Q04952 1785 aa0.4□□□□□ -2.35
ASM4YDL088C PDR12Q02785 1511 aa0.39□□□□□ -2.35
ASM4YDL088C RPO21P04050 1733 aaKnown RBP0.39□□□□□ -2.35
ASM4YDL088C YKL023C-AQ2V2P3 75 aa0.39□□□□□ -2.35
ASM4YDL088C HAP1P0CE41 1502 aa0.39□□□□□ -2.35
ASM4YDL088C YLR157W-DP0CE99 70 aa0.38□□□□□ -2.35
ASM4YDL088C YMR001C-AQ8TGS9 76 aa0.38□□□□□ -2.35
ASM4YDL088C VTH1P40438 1549 aa0.37□□□□□ -2.35
ASM4YDL088C VTH2P40890 1549 aa0.37□□□□□ -2.35
ASM4YDL088C YCF1P39109 1515 aaKnown RBP0.37□□□□□ -2.35
ASM4YDL088C PDR15Q04182 1529 aaKnown RBP0.37□□□□□ -2.35
ASM4YDL088C YOL166W-AQ8TGJ1 51 aa0.36□□□□□ -2.35
ASM4YDL088C YBR230W-AQ3E762 66 aa0.36□□□□□ -2.35
ASM4YDL088C PDR5P33302 1511 aaKnown RBP0.35□□□□□ -2.35
ASM4YDL088C SPO14P36126 1683 aa0.35□□□□□ -2.35
ASM4YDL088C TOS6P48560 102 aa0.35□□□□□ -2.35
ASM4YDL088C SPT6P23615 1451 aaKnown RBP0.34□□□□□ -2.36
ASM4YDL088C UTP20P35194 2493 aaKnown RBP0.33□□□□□ -2.36
ASM4YDL088C SNQ2P32568 1501 aaKnown RBP0.32□□□□□ -2.36
ASM4YDL088C MON2P48563 1636 aaPredicted RBP0.32□□□□□ -2.36
ASM4YDL088C TY1B-DR4Q07793 1604 aa0.32□□□□□ -2.36
ASM4YDL088C COA2Q3E823 68 aa0.32□□□□□ -2.36
ASM4YDL088C SSK2P53599 1579 aa0.31□□□□□ -2.36
ASM4YDL088C RPS27BP38711 82 aa0.31□□□□□ -2.36
ASM4YDL088C RPS29AP41057 56 aaKnown RBP0.31□□□□□ -2.36
ASM4YDL088C YGR146C-AQ8TGT9 53 aa0.3□□□□□ -2.36
ASM4YDL088C CDC25P04821 1589 aa0.29□□□□□ -2.36
ASM4YDL088C YOR192C-CQ3E736 78 aa0.28□□□□□ -2.36
ASM4YDL088C PEP1P32319 1579 aa0.27□□□□□ -2.37
ASM4YDL088C YDR524C-BQ3E6R4 66 aa0.27□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms