RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 DCLRE1AQ6PJP8 1040 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 CLEC20AQ6ZU45 233 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 BBS12Q6ZW61 710 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 LRRC8DQ7L1W4 858 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 RTN4RL1Q86UN2 441 aaPredicted RBP18.08■□□□□ 0.49
PHGDH-208ENST00000641023 MYCBPAPQ8TBZ2 947 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 CLEC4CQ8WTT0 213 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 PIK3R5Q8WYR1 880 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 MAK16Q9BXY0 300 aaKnown RBP18.08■□□□□ 0.49
PHGDH-208ENST00000641023 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.08■□□□□ 0.49
PHGDH-208ENST00000641023 ATP8A1Q9Y2Q0 1164 aa18.08■□□□□ 0.49
PHGDH-208ENST00000641023 GOLGA8KD6RF30 607 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 CD48P09326 243 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 ATF2P15336 505 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 SELPP16109 830 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 CDH6P55285 790 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 CAV1Q03135 178 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 BFSP2Q13515 415 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 PAN2Q504Q3 1202 aaKnown RBP18.08■□□□□ 0.48
PHGDH-208ENST00000641023 LRIG3Q6UXM1 1119 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 BBOF1Q8ND07 529 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 TEKT4Q8WW24 435 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 NKD2Q969F2 451 aaPredicted RBP18.08■□□□□ 0.48
PHGDH-208ENST00000641023 PCED1BQ96HM7 432 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 PEBP4Q96S96 227 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 ACBD6Q9BR61 282 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 PLAAQ9Y263 795 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 NEU2Q9Y3R4 380 aa18.08■□□□□ 0.48
PHGDH-208ENST00000641023 MYBPHLA2RUH7 354 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 ENDOD1O94919 500 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 CYP11A1P05108 521 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 CDK7P50613 346 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 DYNLT1P63172 113 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 FAM189BP81408 668 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 ADIGQ0VDE8 80 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 SLMAPQ14BN4 828 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 PDK2Q15119 407 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 TRIP13Q15645 432 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-208ENST00000641023 CCDC142Q17RM4 750 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 SIX6OS1Q8N1H7 587 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 KRT82Q9NSB4 513 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.07■□□□□ 0.48
PHGDH-208ENST00000641023 M0QZQ0 153 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 BEST1O76090 585 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 KRT14P02533 472 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 ITGAVP06756 1048 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 IVDP26440 423 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 BRCC3P46736 316 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 VCPP55072 806 aaKnown RBP18.07■□□□□ 0.48
PHGDH-208ENST00000641023 MAP3K7CLP57077 242 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 MRPS5P82675 430 aaKnown RBP18.07■□□□□ 0.48
PHGDH-208ENST00000641023 UAP1Q16222 522 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-208ENST00000641023 CYP4V2Q6ZWL3 525 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-208ENST00000641023 RFX6Q8HWS3 928 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 HAUS1Q96CS2 278 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 DDX23Q9BUQ8 820 aaKnown RBP18.07■□□□□ 0.48
PHGDH-208ENST00000641023 TXLNGYQ9BZA5 131 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 TSPYL1Q9H0U9 437 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 KANSL3Q9P2N6 904 aa18.07■□□□□ 0.48
PHGDH-208ENST00000641023 I3L4J1 428 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 APOC4-APOC2K7ER74 178 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 MDM4O15151 490 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 AP1G2O75843 785 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 APOC2P02655 101 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 PMS2P54278 862 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 HDAC4P56524 1084 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 KRT81Q14533 505 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 FAM35AQ86V20 835 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 SLC35B2Q8TB61 432 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 URGCPQ8TCY9 931 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 RSPH1Q8WYR4 309 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 CENPIQ92674 756 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-208ENST00000641023 FAM149B1Q96BN6 582 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 C11orf84Q9BUA3 381 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-208ENST00000641023 UNC93B1Q9H1C4 597 aa18.06■□□□□ 0.48
PHGDH-208ENST00000641023 TDRD15B5MCY1 1934 aaKnown RBP18.05■□□□□ 0.48
PHGDH-208ENST00000641023 GOLGA6L10A6NI86 522 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 YY1P25490 414 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 MATKP42679 507 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 YWHAZP63104 245 aaKnown RBP18.05■□□□□ 0.48
PHGDH-208ENST00000641023 OTUD4Q01804 1114 aaKnown RBP18.05■□□□□ 0.48
PHGDH-208ENST00000641023 TFDP2Q14188 446 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 TERF2Q15554 542 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 OASLQ15646 514 aaKnown RBP18.05■□□□□ 0.48
PHGDH-208ENST00000641023 RAB6CQ53S08 254 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 FAM126BQ8IXS8 530 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 THEM5Q8N1Q8 247 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 ALLCQ8N6M5 410 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 ACTL9Q8TC94 416 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 HASPINQ8TF76 798 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 SMARCD1Q96GM5 515 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 PKNOX2Q96KN3 472 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 BEGAINQ9BUH8 593 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 RAB6CQ9H0N0 254 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 ADAM21Q9UKJ8 722 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 FBXO21O94952 628 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 COL6A1P12109 1028 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 KLRC2P26717 231 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 TKTL1P51854 596 aa18.05■□□□□ 0.48
PHGDH-208ENST00000641023 DPYSL3Q14195 570 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms