RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 UBA3Q8TBC4 463 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 GRK7Q8WTQ7 553 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 C18orf25Q96B23 403 aaPredicted RBP14.54□□□□□ -0.08
ATRIP-208ENST00000639561 FTHL17Q9BXU8 183 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 OSBPL7Q9BZF2 842 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 SYNCQ9H7C4 482 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 PLEKHA5Q9HAU0 1116 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 HOMER3Q9NSC5 361 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 TMEM51Q9NW97 253 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 RFXAPO00287 272 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 GABRB2P47870 512 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 VPS41P49754 854 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 SMTNL2Q2TAL5 461 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 KRT71Q3SY84 523 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 PRUNE1Q86TP1 453 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 FNIP1Q8TF40 1166 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 SNF8Q96H20 258 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 NME7Q9Y5B8 376 aa14.54□□□□□ -0.08
ATRIP-208ENST00000639561 hCG_1818297A0A087WSY0 165 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 C3orf70A6NLC5 250 aaPredicted RBP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 EIF3HO15372 352 aaKnown RBP eCLIP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 RARGP13631 454 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 HPDP32754 393 aaPredicted RBP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 CHKAP35790 457 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 CDKN2BP42772 138 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 EIF3BP55884 814 aaKnown RBP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 IFFO1Q0D2I5 559 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 DENND2CQ68D51 928 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 ALKAL1Q6UXT8 129 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 MCRS1Q96EZ8 462 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 MRPL45Q9BRJ2 306 aaKnown RBP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 FAM129AQ9BZQ8 928 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 DNPEPQ9ULA0 475 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 CDH23Q9H251 3354 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 LRRD1A4D1F6 860 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 RIPK2O43353 540 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 LIASO43766 372 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 RECQL4O94761 1208 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 UPP2O95045 317 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 ITIH2P19823 946 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 AKAP5P24588 427 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 CDC42EP1Q00587 391 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 GUCY1A3Q02108 690 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 ZNF268Q14587 947 aaPredicted RBP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 KCNT1Q5JUK3 1230 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 POLNQ7Z5Q5 900 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 CCDC25Q86WR0 208 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 PIWIL1Q96J94 861 aaKnown RBP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 NT5C1AQ9BXI3 368 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 BCCIPQ9P287 314 aaKnown RBP eCLIP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 WDR35Q9P2L0 1181 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 FEZ2Q9UHY8 353 aaPredicted RBP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 TSPAN16Q9UKR8 245 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 DERAQ9Y315 318 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 SNX9Q9Y5X1 595 aa14.53□□□□□ -0.08
ATRIP-208ENST00000639561 PDCD11Q14690 1871 aaKnown RBP14.53□□□□□ -0.08
ATRIP-208ENST00000639561 PIK3R2O00459 728 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 TJP3O95049 919 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 ATF2P15336 505 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 KLRC2P26717 231 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 PTPN7P35236 360 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 ITGA8P53708 1063 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 MYO1EQ12965 1108 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 SLMAPQ14BN4 828 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 TFDP3Q5H9I0 405 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 LCLAT1Q6UWP7 414 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 GLIS1Q8NBF1 620 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 FBXO22Q8NEZ5 403 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 UHMK1Q8TAS1 419 aaKnown RBP14.52□□□□□ -0.08
ATRIP-208ENST00000639561 GDPD5Q8WTR4 605 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 ZWILCHQ9H900 591 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 CNTN3Q9P232 1028 aa14.52□□□□□ -0.08
ATRIP-208ENST00000639561 NOVA2Q9UNW9 492 aaKnown RBP14.52□□□□□ -0.08
ATRIP-208ENST00000639561 TTC3P53804 2025 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 ADCY8P40145 1251 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 CETN2P41208 172 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 COPS2P61201 443 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 MRPS5P82675 430 aaKnown RBP14.52□□□□□ -0.09
ATRIP-208ENST00000639561 SKIV2LQ15477 1246 aaKnown RBP14.52□□□□□ -0.09
ATRIP-208ENST00000639561 AGBL2Q5U5Z8 902 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 TRNP1Q6NT89 227 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 HAUS1Q96CS2 278 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 APOL6Q9BWW8 343 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 TRIM6Q9C030 488 aaPredicted RBP14.52□□□□□ -0.09
ATRIP-208ENST00000639561 RABEP2Q9H5N1 569 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 FAM124BQ9H5Z6 455 aaPredicted RBP14.52□□□□□ -0.09
ATRIP-208ENST00000639561 PRDM6Q9NQX0 595 aa14.52□□□□□ -0.09
ATRIP-208ENST00000639561 DDX56Q9NY93 547 aaKnown RBP14.52□□□□□ -0.09
ATRIP-208ENST00000639561 PIN4Q9Y237 131 aaKnown RBP14.52□□□□□ -0.09
ATRIP-208ENST00000639561 E5RJQ4 531 aa14.51□□□□□ -0.09
ATRIP-208ENST00000639561 TULP2O00295 520 aa14.51□□□□□ -0.09
ATRIP-208ENST00000639561 LPXNO60711 386 aa14.51□□□□□ -0.09
ATRIP-208ENST00000639561 CD52P31358 61 aa14.51□□□□□ -0.09
ATRIP-208ENST00000639561 YARSP54577 528 aaKnown RBP14.51□□□□□ -0.09
ATRIP-208ENST00000639561 PPARDQ03181 441 aa14.51□□□□□ -0.09
ATRIP-208ENST00000639561 BYSLQ13895 437 aaKnown RBP14.51□□□□□ -0.09
ATRIP-208ENST00000639561 PCBP1Q15365 356 aaKnown RBP eCLIP14.51□□□□□ -0.09
ATRIP-208ENST00000639561 SKIDA1Q1XH10 827 aa14.51□□□□□ -0.09
ATRIP-208ENST00000639561 AAK1Q2M2I8 961 aa14.51□□□□□ -0.09
ATRIP-208ENST00000639561 PPP1R26Q5T8A7 1209 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms