RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 hCG_2014768A0A024R1R8 64 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 A0A1B0GTH6 734 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 AVPR1AP37288 418 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 TALDO1P37837 337 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 FXR2P51116 673 aaKnown RBP eCLIP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 MOSPD2Q8NHP6 518 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 NUDT2P50583 147 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 OXCT1P55809 520 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 CHST12Q9NRB3 414 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 AP4S1Q9Y587 144 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 FBXO21O94952 628 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 RBP3P10745 1247 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 CNTFP26441 200 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 PEX5P50542 639 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 C1orf131Q8NDD1 294 aaKnown RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 OSGEPL1Q9H4B0 414 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 MROH8Q9H579 483 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 MADDQ8WXG6 1647 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 E9PBE3 544 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 RPA1P27694 616 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 SOX11P35716 441 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 NAMPTP43490 491 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 SUGP1Q8IWZ8 645 aaKnown RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 MED8Q96G25 268 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 NSL1Q96IY1 281 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 EPC1Q9H2F5 836 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 AKAP7Q9P0M2 348 aaPredicted RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 SDR42E2A6NKP2 422 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 PBLDP30039 288 aaPredicted RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 GCLCP48506 637 aaPredicted RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 CDC42EP5Q6NZY7 148 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 NEK10Q6ZWH5 1172 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 DDI1Q8WTU0 396 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 CARD9Q9H257 536 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 PARVBQ9HBI1 364 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 KLHL20Q9Y2M5 609 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 SPATA31E1Q6ZUB1 1445 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 SMIM22K7EJ46 135 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 COMTP21964 271 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 CDK20Q8IZL9 346 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 LRRC71Q8N4P6 559 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 GPRASP2Q96D09 838 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 ADI1Q9BV57 179 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 FRMPD1Q5SYB0 1578 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 SMIM31A0A1B0GVY4 71 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 CCDC189A1A4V9 331 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 ICAM1P05362 532 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 ITGA8P53708 1063 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 SNX30Q5VWJ9 437 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 HPS3Q969F9 1004 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 MAP10Q9P2G4 905 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 VPS28Q9UK41 221 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 CYB561D2O14569 222 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 NCAM2O15394 837 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 PLA2G6O60733 806 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 DGKIO75912 1065 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 DSG1Q02413 1049 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 ILF2Q12905 390 aaKnown RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 TSGA10IPQ3SY00 556 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 ACAD10Q6JQN1 1059 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 SLC22A9Q8IVM8 553 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 ZCCHC2Q9C0B9 1178 aaKnown RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 VPS51Q9UID3 782 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 TMEM120BA0PK00 339 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 TM9SF1O15321 606 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 PPP1R37O75864 691 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 PCDH8O95206 1070 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 NOS3P29474 1203 aa11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 ACTN3Q08043 901 aaPredicted RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 RUVBL2Q9Y230 463 aaKnown RBP11.53□□□□□ -0.56
CCDC144B-208ENST00000618081 YY1P25490 414 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 ATXN3P54252 364 aaPredicted RBP11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 CHRNB3Q05901 458 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 STARD3Q14849 445 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 TRIP10Q15642 601 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 ZC2HC1CQ53FD0 456 aaPredicted RBP11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 CCT8L2Q96SF2 557 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 KANSL3Q9P2N6 904 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 ITGALP20701 1170 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 CCND1P24385 295 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 RPS6P62753 249 aaKnown RBP11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 SGCGQ13326 291 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 KYNUQ16719 465 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 FUT11Q495W5 492 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 DPF3Q92784 378 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 TRIM51Q9BSJ1 452 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 TMEM39BQ9GZU3 492 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 FBXO44Q9H4M3 255 aa11.52□□□□□ -0.56
CCDC144B-208ENST00000618081 DDX39BQ13838 428 aaKnown RBP11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 PTPAQ15257 358 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 NLRP9Q7RTR0 991 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 AGBL3Q8NEM8 1001 aa11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF512BQ96KM6 892 aaPredicted RBP11.52□□□□□ -0.57
CCDC144B-208ENST00000618081 PI4K2AQ9BTU6 479 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms