RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 KLHL35Q6PF15 583 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 OTOAQ7RTW8 1153 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 RNF169Q8NCN4 708 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 KRT35Q92764 455 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 VPS37BQ9H9H4 285 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 AGO2Q9UKV8 859 aaKnown RBP16■□□□□ 0.15
PPFIA3-206ENST00000602655 RBMX2Q9Y388 322 aaKnown RBP16■□□□□ 0.15
PPFIA3-206ENST00000602655 HES2Q9Y543 173 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 A0A087WZ62 844 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 PIK3R2O00459 728 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 TTC4O95801 387 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 EDN1P05305 212 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 CDK4P11802 303 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 CLCN2P51788 898 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 ZNF200P98182 395 aaPredicted RBP16■□□□□ 0.15
PPFIA3-206ENST00000602655 FAM182AQ5T1J6 154 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 PATL1Q86TB9 770 aaKnown RBP16■□□□□ 0.15
PPFIA3-206ENST00000602655 MCPH1Q8NEM0 835 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 DNERQ8NFT8 737 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 GIPC3Q8TF64 312 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 SEMA4DQ92854 862 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 BTBD6Q96KE9 485 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 FDXACB1Q9BRP7 624 aaPredicted RBP16■□□□□ 0.15
PPFIA3-206ENST00000602655 TRIM55Q9BYV6 548 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 SELENONQ9NZV5 590 aa16■□□□□ 0.15
PPFIA3-206ENST00000602655 SLC25A27O95847 323 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 BTG3Q14201 252 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 SLC45A4Q5BKX6 768 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 SPRYD7Q5W111 196 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 LVRNQ6Q4G3 990 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 MAML1Q92585 1016 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 TMEM109Q9BVC6 243 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 PLVAPQ9BX97 442 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 TMEM117Q9H0C3 514 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 PTTG2Q9NZH5 202 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 APPL1Q9UKG1 709 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 EXOC7Q9UPT5 735 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 ALG6Q9Y672 507 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 TNPO2O14787 897 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 KRT17Q04695 432 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 DMPKQ09013 629 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 IRF2BP2Q7Z5L9 587 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 OR6Y1Q8NGX8 325 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 RFWD2Q8NHY2 731 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 NPLOC4Q8TAT6 608 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 TSPAN18Q96SJ8 248 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 KLF6Q99612 283 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 ARHGAP39Q9C0H5 1083 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 RPL26L1Q9UNX3 145 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 TCRBV7S2A1N4TA0A589 114 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 HTR3EA5X5Y0 456 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 EDF1O60869 148 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 MYL3P08590 195 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 CTSHP09668 335 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 RPA3P35244 121 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 CAPSQ13938 189 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 GLRA4Q5JXX5 417 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 SLC39A4Q6P5W5 647 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 RIPOR1Q6ZS17 1223 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 MS4A4AQ96JQ5 239 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 MRPL1Q9BYD6 325 aaKnown RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 GPBP1L1Q9HC44 474 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 ANKEF1Q9NU02 776 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 RBAKQ9NYW8 714 aaPredicted RBP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 SEL1LQ9UBV2 794 aa15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.99■□□□□ 0.15
PPFIA3-206ENST00000602655 GRIA2P42262 883 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 HALP42357 657 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 PDK3Q15120 406 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 KLHDC10Q6PID8 442 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 RAPH1Q70E73 1250 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 SV2AQ7L0J3 742 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 TMEM192Q8IY95 271 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 OR6J1Q8NGC5 347 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 PSPC1Q8WXF1 523 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 CASP10Q92851 521 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 GCNAQ96QF7 691 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 GPR20Q99678 358 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 SAR1AQ9NR31 198 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 INIPQ9NRY2 104 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 NDUFA13Q9P0J0 144 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 PPM1HQ9ULR3 514 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 MCM3APO60318 1980 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 MYH11P35749 1972 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 SGPL1O95470 568 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 TFPTP0C1Z6 253 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 COILP38432 576 aaPredicted RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 DRG2P55039 364 aaKnown RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 PLCB3Q01970 1234 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 SGO2Q562F6 1265 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 RABGAP1LQ5R372 815 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 LDLRAD1Q5T700 205 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 NIPA1Q7RTP0 329 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 TTC7BQ86TV6 843 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 C10orf82Q8WW14 230 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 RFFLQ8WZ73 363 aa15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 PRR11Q96HE9 360 aaPredicted RBP15.98■□□□□ 0.15
PPFIA3-206ENST00000602655 FAM118BQ9BPY3 351 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms