RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CPB1P15086 417 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 SDC4P31431 198 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 PCK1P35558 622 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 MAGEA11P43364 429 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 PTPN9P43378 593 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 TUBB4BP68371 445 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 SMARCB1Q12824 385 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 ERCC6LQ2NKX8 1250 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 SEL1L2Q5TEA6 688 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 AADACL2Q6P093 401 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 SCML4Q8N228 414 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 UBXN4Q92575 508 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 C11orf84Q9BUA3 381 aaPredicted RBP21.79■■□□□ 1.08
PNKP-203ENST00000593946 PLVAPQ9BX97 442 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 BACE2Q9Y5Z0 518 aa21.79■■□□□ 1.08
PNKP-203ENST00000593946 SART1O43290 800 aaKnown RBP21.78■■□□□ 1.08
PNKP-203ENST00000593946 DAB1O75553 588 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 FGGP02679 453 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 LINC00271P0C7V0 271 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 GRIK1P39086 918 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 C2orf54Q08AI8 447 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 CLUL1Q15846 466 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 PSMD5Q16401 504 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 C15orf59Q2T9L4 293 aaPredicted RBP21.78■■□□□ 1.08
PNKP-203ENST00000593946 TEX35Q5T0J7 233 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 SH3PXD2AQ5TCZ1 1133 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 PM20D1Q6GTS8 502 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 SLC8B1Q6J4K2 584 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 BHLHA9Q7RTU4 235 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 RIN2Q8WYP3 895 aaPredicted RBP21.78■■□□□ 1.08
PNKP-203ENST00000593946 SLC9A7Q96T83 725 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 DDX23Q9BUQ8 820 aaKnown RBP21.78■■□□□ 1.08
PNKP-203ENST00000593946 HERC2P3Q9BVR0 1158 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 ZMYND8Q9ULU4 1186 aaPredicted RBP21.78■■□□□ 1.08
PNKP-203ENST00000593946 INSL6Q9Y581 213 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 USP3Q9Y6I4 520 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 PLXNA4Q9HCM2 1894 aa21.78■■□□□ 1.08
PNKP-203ENST00000593946 MTMR11A4FU01 709 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 TNFRSF10BO14763 440 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 ZBED1O96006 694 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 PPM1AP35813 382 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 YWHAZP63104 245 aaKnown RBP21.77■■□□□ 1.08
PNKP-203ENST00000593946 TXNRD3NBQ6F5E7 133 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 DDX53Q86TM3 631 aaKnown RBP21.77■■□□□ 1.08
PNKP-203ENST00000593946 FBXO22Q8NEZ5 403 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 EXD1Q8NHP7 514 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 FAM149B1Q96BN6 582 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 C8orf48Q96LL4 319 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 PGLYRP2Q96PD5 576 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 NAP1L3Q99457 506 aaPredicted RBP21.77■■□□□ 1.08
PNKP-203ENST00000593946 RBM12Q9NTZ6 932 aaKnown RBP21.77■■□□□ 1.08
PNKP-203ENST00000593946 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.77■■□□□ 1.08
PNKP-203ENST00000593946 CDY1Q9Y6F8 540 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 TRIM66O15016 1216 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 VNN2O95498 520 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 USP17L7P0C7H9 530 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 IL1R2P27930 398 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 MIPP30301 263 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 GJC1P36383 396 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 MATKP42679 507 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 ARPP19P56211 112 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 ATP11AP98196 1134 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 DSG1Q02413 1049 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 HADHQ16836 314 aaKnown RBP21.77■■□□□ 1.08
PNKP-203ENST00000593946 HERC6Q8IVU3 1022 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 FIBCD1Q8N539 461 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 ATAD1Q8NBU5 361 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 PHOSPHO2Q8TCD6 241 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 SPPL2BQ8TCT7 592 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 C2orf15Q8WU43 125 aaKnown RBP21.77■■□□□ 1.08
PNKP-203ENST00000593946 IRGQQ8WZA9 623 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 TSC1Q92574 1164 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 CENPIQ92674 756 aaPredicted RBP21.77■■□□□ 1.08
PNKP-203ENST00000593946 CLP1Q92989 425 aaKnown RBP21.77■■□□□ 1.08
PNKP-203ENST00000593946 SLC2A13Q96QE2 648 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 ZBED2Q9BTP6 218 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 AAASQ9NRG9 546 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 SLC4A7Q9Y6M7 1214 aa21.77■■□□□ 1.08
PNKP-203ENST00000593946 YJEFN3A6XGL0 299 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 E7ENQ6 273 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 DESP17661 470 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 SLC5A3P53794 718 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 CDO1Q16878 200 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 LONRF2Q1L5Z9 754 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 ATP13A4Q4VNC1 1196 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 RAB6CQ53S08 254 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 KIAA1841Q6NSI8 718 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 RNF19BQ6ZMZ0 732 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 HFE2Q6ZVN8 426 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 SCN4BQ8IWT1 228 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 MMGT1Q8N4V1 131 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 TTC9BQ8N6N2 239 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 FAM172AQ8WUF8 416 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 ADAM33Q9BZ11 813 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 RAB6CQ9H0N0 254 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 POPDC2Q9HBU9 364 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 DDX56Q9NY93 547 aaKnown RBP21.76■■□□□ 1.07
PNKP-203ENST00000593946 USP18Q9UMW8 372 aa21.76■■□□□ 1.07
PNKP-203ENST00000593946 ADAM12O43184 909 aa21.75■■□□□ 1.07
PNKP-203ENST00000593946 ZRANB2O95218 330 aaKnown RBP eCLIP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms