RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 BHLHA9Q7RTU4 235 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 HERC6Q8IVU3 1022 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 KATNAL2Q8IYT4 538 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 PGLYRP2Q96PD5 576 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 HERC2P3Q9BVR0 1158 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 USP3Q9Y6I4 520 aa27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 V9GYY5 206 aaPredicted RBP27.28■■□□□ 1.96
SCAMP4-210ENST00000588555 MTMR11A4FU01 709 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 GLI1P08151 1106 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 GRIK1P39086 918 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 SSR1P43307 286 aaKnown RBP27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 PTPN9P43378 593 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 PSMD5Q16401 504 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 TXNRD3NBQ6F5E7 133 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 PM20D1Q6GTS8 502 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 SCML4Q8N228 414 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 ATAD1Q8NBU5 361 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 NOA1Q8NC60 698 aaKnown RBP27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 FBXO22Q8NEZ5 403 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 SLC9A7Q96T83 725 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 DDX23Q9BUQ8 820 aaKnown RBP27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 CDY1Q9Y6F8 540 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 SLC4A7Q9Y6M7 1214 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 COL4A4P53420 1690 aaPredicted RBP27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 ADAM12O43184 909 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 ZBED1O96006 694 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 SDC4P31431 198 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 PCK1P35558 622 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 ARPP19P56211 112 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 YWHAZP63104 245 aaKnown RBP27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 DSG1Q02413 1049 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 SMARCB1Q12824 385 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 RNF19BQ6ZMZ0 732 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 POLNQ7Z5Q5 900 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 DDX53Q86TM3 631 aaKnown RBP27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 FIBCD1Q8N539 461 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 PHOSPHO2Q8TCD6 241 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 SP7Q8TDD2 431 aaPredicted RBP27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 GOLGA1Q92805 767 aa27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 CLP1Q92989 425 aaKnown RBP27.27■■□□□ 1.96
SCAMP4-210ENST00000588555 YJEFN3A6XGL0 299 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 E7ENQ6 273 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 DAB1O75553 588 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 RNF8O76064 485 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 FGGP02679 453 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 USP17L7P0C7H9 530 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 IL1R2P27930 398 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 PPM1AP35813 382 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 ATP13A4Q4VNC1 1196 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 RAB6CQ53S08 254 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 HFE2Q6ZVN8 426 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 TTC9BQ8N6N2 239 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 FAM149B1Q96BN6 582 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 C8orf48Q96LL4 319 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 SLC2A13Q96QE2 648 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 ZBED2Q9BTP6 218 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 ADAM33Q9BZ11 813 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 RAB6CQ9H0N0 254 aa27.26■■□□□ 1.95
SCAMP4-210ENST00000588555 SART1O43290 800 aaKnown RBP27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 MIPP30301 263 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 MATKP42679 507 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 C2orf54Q08AI8 447 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 ERCC6LQ2NKX8 1250 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 RASIP1Q5U651 963 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 KIAA1841Q6NSI8 718 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 SPPL2BQ8TCT7 592 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 CENPIQ92674 756 aaPredicted RBP27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 RAD9AQ99638 391 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 CRISPLD1Q9H336 500 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 RBM12Q9NTZ6 932 aaKnown RBP27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 FYNP06241 537 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 RPL17P18621 184 aaKnown RBP27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 TFE3P19532 575 aaPredicted RBP27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 GJC1P36383 396 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 GLUD2P49448 558 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 SLC5A3P53794 718 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 ATP11AP98196 1134 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 ROR1Q01973 937 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 SEL1L2Q5TEA6 688 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 SCN4BQ8IWT1 228 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 DEFB106AQ8N104 65 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 EXD1Q8NHP7 514 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 SCAMP5Q8TAC9 235 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 C2orf15Q8WU43 125 aaKnown RBP27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 IRGQQ8WZA9 623 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 TSC1Q92574 1164 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 CLSTN3Q9BQT9 956 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 AAASQ9NRG9 546 aa27.25■■□□□ 1.95
SCAMP4-210ENST00000588555 WDR27A2RRH5 827 aa27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 ATP2A2P16615 1042 aaKnown RBP27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 CDO1Q16878 200 aa27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 TEX35Q5T0J7 233 aa27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 CYP4V2Q6ZWL3 525 aaPredicted RBP27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 FAM172AQ8WUF8 416 aa27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 UBXN4Q92575 508 aa27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 NT5C3BQ969T7 300 aa27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 LBHD1Q9BQE6 289 aaPredicted RBP27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 POPDC2Q9HBU9 364 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms