RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 AXLP30530 894 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SCTRP47872 440 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CBLBQ13191 982 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 GPR162Q16538 588 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 MSS51Q4VC12 460 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 C9orf57Q5W0N0 161 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 FBXW10Q5XX13 1052 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 NUGGCQ68CJ6 796 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 GDAP1Q8TB36 358 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 OSMRQ99650 979 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 WDR83Q9BRX9 315 aaKnown RBP17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CDHR5Q9HBB8 845 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PSMC3IPQ9P2W1 217 aaPredicted RBP17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 HESX1Q9UBX0 185 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 RABGEF1Q9UJ41 708 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 UBQLN1Q9UMX0 589 aaKnown RBP17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 GNEQ9Y223 722 aaKnown RBP17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 GINS2Q9Y248 185 aa17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 TCRBV7S3A2A0A539 114 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 MDM4O15151 490 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 BANF1O75531 89 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 GRAP2O75791 330 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 GSTA1P08263 222 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 IL4RP24394 825 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SDC4P31431 198 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 GEMIN4P57678 1058 aaKnown RBP17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CDO1Q16878 200 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 NPNTQ6UXI9 565 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ANKMY2Q8IV38 441 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PDIK1LQ8N165 341 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 DENND1AQ8TEH3 1009 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 TGS1Q96RS0 853 aaKnown RBP17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 TRABDQ9H4I3 376 aa17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 XPO7Q9UIA9 1087 aaKnown RBP17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SMG5Q9UPR3 1016 aaKnown RBP17.22■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ZNF487B1APH4 448 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PAPSS1O43252 624 aaPredicted RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 RECQL4O94761 1208 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ASMTLO95671 621 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CYP2C9P11712 490 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 TGM2P21980 687 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 WDR4P57081 412 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 IL9RQ01113 521 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 RNASELQ05823 741 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 KRT81Q14533 505 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SOWAHAQ2M3V2 549 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ZC3H12AQ5D1E8 599 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 DARS2Q6PI48 645 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 TRPM8Q7Z2W7 1104 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 FAM172AQ8WUF8 416 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 RTP4Q96DX8 246 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 TSPAN18Q96SJ8 248 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PTPN18Q99952 460 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 DHRS4Q9BTZ2 278 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SSU72Q9NP77 194 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 FAM49BQ9NUQ9 324 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 HES2Q9Y543 173 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PIRO00625 290 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 DYNC1LI2O43237 492 aaPredicted RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 GABBR2O75899 941 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 DNAJC8O75937 253 aaPredicted RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SUN1O94901 812 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 DESP17661 470 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 KRT15P19012 456 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SSTR1P30872 391 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 RPL34P49207 117 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ADAM17P78536 824 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 BASP1P80723 227 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ATP11AP98196 1134 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PDE4CQ08493 712 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 KLHL38Q2WGJ6 581 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SLC9A4Q6AI14 798 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CAPN12Q6ZSI9 719 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ARCQ7LC44 396 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PLD5Q8N7P1 536 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 FBXO36Q8NEA4 188 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 OR6B3Q8NGW1 331 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 FAF2Q96CS3 445 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SMC6Q96SB8 1091 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 NXF3Q9H4D5 531 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 ACSS3Q9H6R3 686 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 PCDH18Q9HCL0 1135 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 SLC12A4Q9UP95 1085 aa17.21■□□□□ 0.35
APOC4-APOC2-201ENST00000585685 CFAP69A5D8W1 941 aa17.2■□□□□ 0.34
APOC4-APOC2-201ENST00000585685 A8MXQ7 604 aa17.2■□□□□ 0.34
APOC4-APOC2-201ENST00000585685 APOL1O14791 398 aa17.2■□□□□ 0.34
APOC4-APOC2-201ENST00000585685 CHADO15335 359 aa17.2■□□□□ 0.34
APOC4-APOC2-201ENST00000585685 RASSF9O75901 435 aa17.2■□□□□ 0.34
APOC4-APOC2-201ENST00000585685 CD4P01730 458 aa17.2■□□□□ 0.34
APOC4-APOC2-201ENST00000585685 TAC1P20366 129 aa17.2■□□□□ 0.34
APOC4-APOC2-201ENST00000585685 SCNN1AP37088 669 aa17.2■□□□□ 0.34
APOC4-APOC2-201ENST00000585685 PTPN9P43378 593 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms