RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TUBGCP4Q9UGJ1 667 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 XPO7Q9UIA9 1087 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RABGEF1Q9UJ41 708 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 UBQLN1Q9UMX0 589 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC12A4Q9UP95 1085 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ARL2BPQ9Y2Y0 163 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SNX9Q9Y5X1 595 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TCRBV7S3A2A0A539 114 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GLTPD2A6NH11 291 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PIK3R2O00459 728 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PPEF2O14830 753 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CHADO15335 359 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GPR32O75388 356 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SPAG7O75391 227 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BANF1O75531 89 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RASSF9O75901 435 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ASMTLO95671 621 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SMIM10L2AP0DMW4 78 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SMIM10L2BP0DMW5 78 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ATP2A2P16615 1042 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HOXA11P31270 313 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SDC4P31431 198 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FOXN2P32314 431 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 WDR4P57081 412 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BASP1P80723 227 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GAD2Q05329 585 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 XRCC4Q13426 336 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 IRF5Q13568 498 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KCNJ11Q14654 390 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MTFR1Q15390 333 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CDO1Q16878 200 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BBS9Q3SYG4 887 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MSS51Q4VC12 460 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RAB6CQ53S08 254 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SH3PXD2AQ5TCZ1 1133 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PMF1Q6P1K2 205 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NOTUMQ6P988 496 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C1orf228Q6PIY5 440 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RGS9BPQ6ZS82 235 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TMEM110Q86TL2 294 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PALM2Q8IXS6 379 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PDIK1LQ8N165 341 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FBXO36Q8NEA4 188 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NPLOC4Q8TAT6 608 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC35F5Q8WV83 523 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RTP4Q96DX8 246 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PIWIL1Q96J94 861 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZMAT2Q96NC0 199 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TSPAN18Q96SJ8 248 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SYT17Q9BSW7 474 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SNRNP25Q9BV90 132 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 EIF2AQ9BY44 585 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FRMD8Q9BZ67 464 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DNAI2Q9GZS0 605 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RAB6CQ9H0N0 254 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FAM49AQ9H0Q0 323 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZNF408Q9H9D4 720 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NGRNQ9NPE2 291 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FAM49BQ9NUQ9 324 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HAUS2Q9NVX0 235 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GPATCH2LQ9NWQ4 482 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC5A4Q9NY91 659 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CNTN3Q9P232 1028 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PAK5Q9P286 719 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PRKAG3Q9UGI9 489 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NME7Q9Y5B8 376 aa9.75□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CITO14578 2027 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BCLAF3A2AJT9 711 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CFAP73A6NFT4 308 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MDM4O15151 490 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PAPSS1O43252 624 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 XPOTO43592 962 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SPAG6O75602 509 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GRAP2O75791 330 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CAPN15O75808 1086 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 F2P00734 622 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CD4P01730 458 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CYP2C9P11712 490 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DARSP14868 501 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SSTR1P30872 391 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GBP2P32456 591 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MSH2P43246 934 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PTPN9P43378 593 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BCAT1P54687 386 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FKBP1BP68106 108 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ATP11AP98196 1134 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ADCY1Q08828 1119 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BST2Q10589 180 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SF3A3Q12874 501 aaKnown RBP eCLIP9.74□□□□□ -0.851e-6■■□□□ 14.1
CDK5RAP3-208ENST00000578525 EFTUD2Q15029 972 aaKnown RBP eCLIP9.74□□□□□ -0.857e-16■□□□□ 10
CDK5RAP3-208ENST00000578525 ZKSCAN8Q15776 578 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FAM110CQ1W6H9 321 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GALNTL6Q49A17 601 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZC3H12AQ5D1E8 599 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C9orf57Q5W0N0 161 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RNF43Q68DV7 783 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC9A4Q6AI14 798 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms