RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 CTU1Q7Z7A3 348 aaKnown RBP12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 DEFB128Q7Z7B8 93 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 TSEN2Q8NCE0 465 aaKnown RBP12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 CAVIN3Q969G5 261 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 CCDC114Q96M63 670 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 CRISPLD2Q9H0B8 497 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 LRRC4Q9HBW1 653 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 GPATCH2LQ9NWQ4 482 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 OGFRQ9NZT2 677 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 DSEQ9UL01 958 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 HPCAL4Q9UM19 191 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 PCDHB7Q9Y5E2 793 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 TTC3P53804 2025 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 PRPSAP2O60256 369 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 KDELR1P24390 212 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 PTPN7P35236 360 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 TKTL1P51854 596 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 ATXN1P54253 815 aaKnown RBP12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 COPS2P61201 443 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 KIAA0100Q14667 2235 aaKnown RBP12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 LRRTM3Q86VH5 581 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 KRT222Q8N1A0 295 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 SIX6OS1Q8N1H7 587 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 KCTD6Q8NC69 237 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 FAM193BQ96PV7 902 aaPredicted RBP12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 PKMYT1Q99640 499 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 ACBD6Q9BR61 282 aa12.59□□□□□ -0.39
TOM1L1-213ENST00000572405 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 DCDC2CA8MYV0 355 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 TJP3O95049 919 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 BDNFP23560 247 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 SCNN1AP37088 669 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 RPL21P46778 160 aaKnown RBP12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 HDAC4P56524 1084 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 KRT17Q04695 432 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 YWHAHQ04917 246 aaPredicted RBP12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 PPP1R7Q15435 360 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 KCTD13Q8WZ19 329 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 SMARCD1Q96GM5 515 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 RUNDC3BQ96NL0 473 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 CASD1Q96PB1 797 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 CALN1Q9BXU9 219 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 ULBP1Q9BZM6 244 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 ELAC1Q9H777 363 aaKnown RBP12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 FAM114A2Q9NRY5 505 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 LRFN2Q9ULH4 789 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 PCDHB8Q9UN66 801 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 ATP11BQ9Y2G3 1177 aa12.58□□□□□ -0.4
TOM1L1-213ENST00000572405 OR4Q2P0C623 313 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 COL6A1P12109 1028 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 TYMPP19971 482 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 PTPN9P43378 593 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 MRPS5P82675 430 aaKnown RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 MMRN1Q13201 1228 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 TRIP13Q15645 432 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 CCNG2Q16589 344 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 FAM171BQ6P995 826 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 HFE2Q6ZVN8 426 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 CMASQ8NFW8 434 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 SPATA18Q8TC71 538 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 APBB2Q92870 758 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 TBCBQ99426 244 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 C11orf84Q9BUA3 381 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 NRDE2Q9H7Z3 1164 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 GRHL1Q9NZI5 618 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 CALCOCO1Q9P1Z2 691 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 PCDH10Q9P2E7 1040 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 SAE1Q9UBE0 346 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 HHLA1C9JL84 531 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 TMEM189-UBE2V1I3L0A0 370 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 NRP1O14786 923 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 HSF2BPO75031 334 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 PBX3P40426 434 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 CDH6P55285 790 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 PITX1P78337 314 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 CBX1P83916 185 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 NNTQ13423 1086 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 ZC3H12AQ5D1E8 599 aaKnown RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 EFHC1Q5JVL4 640 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 DEFB106AQ8N104 65 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 THEM5Q8N1Q8 247 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 EIF1ADQ8N9N8 165 aaKnown RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 SLCO2A1Q92959 643 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 SNRNP25Q9BV90 132 aaKnown RBP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 DNPEPQ9ULA0 475 aa12.57□□□□□ -0.4
TOM1L1-213ENST00000572405 H3BQF6 201 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 LIASO43766 372 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 CST8O60676 142 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 CXCL10P02778 98 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 DESP17661 470 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 PAX3P23760 479 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 TSPY1Q01534 308 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 TAZQ16635 292 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 CA9Q16790 459 aa12.56□□□□□ -0.4
TOM1L1-213ENST00000572405 ZDHHC24Q6UX98 284 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms