RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 BCL7CQ8WUZ0 217 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-222ENST00000570139 HOXB13Q92826 284 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-222ENST00000570139 ZNF566Q969W8 418 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 TBC1D20Q96BZ9 403 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 MRGPRX4Q96LA9 322 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 RMDN3Q96TC7 470 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 TMEM120AQ9BXJ8 343 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 OSBPL6Q9BZF3 934 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 FOXP1Q9H334 677 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-222ENST00000570139 TPSG1Q9NRR2 321 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 PDP2Q9P2J9 529 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 SEC63Q9UGP8 760 aaKnown RBP7.85□□□□□ -1.15
CNOT1-222ENST00000570139 CPA4Q9UI42 421 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 MAD2L2Q9UI95 211 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 HACL1Q9UJ83 578 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 GJD2Q9UKL4 321 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 PCDHAC2Q9Y5I4 1007 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 NCAM2O15394 837 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 TMEM127O75204 238 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 EFEMP2O95967 443 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 MMP1P03956 469 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 LTA4HP09960 611 aaKnown RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 PDHBP11177 359 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 HARSP12081 509 aaKnown RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 SCG2P13521 617 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 RXRAP19793 462 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 SUMO3P55854 103 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 ERVFRD-1P60508 538 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 BNIP3Q12983 259 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 RESTQ13127 1097 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 STILQ15468 1287 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 GPR162Q16538 588 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 PFKFB3Q16875 520 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 MSMPQ1L6U9 139 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 SLC35G1Q2M3R5 365 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 KLHL40Q2TBA0 621 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 MST1LQ2TV78 715 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 SUPT20HL1Q3ZLR7 823 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 ZACNQ401N2 412 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 KANK2Q63ZY3 851 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 MCTP1Q6DN14 999 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 CYP26C1Q6V0L0 522 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 KRBA2Q6ZNG9 492 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 USP50Q70EL3 339 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 BEND5Q7L4P6 421 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 CXXC5Q7LFL8 322 aaKnown RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 MAATS1Q7Z4T9 603 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 ATP11CQ8NB49 1132 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 VRK1Q99986 396 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 EIF2AQ9BY44 585 aaKnown RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 STK33Q9BYT3 514 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 INO80BQ9C086 356 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-222ENST00000570139 TMEM39BQ9GZU3 492 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 GLT8D2Q9H1C3 349 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 DLL4Q9NR61 685 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 CLIP2Q9UDT6 1046 aa7.84□□□□□ -1.15
CNOT1-222ENST00000570139 A0A1B0GVC2 190 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 A0A1W2PR48 441 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 KLRF2D3W0D1 207 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 IRAK2O43187 625 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 PLA2G6O60733 806 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 PRAMEF4O60810 478 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 FSBPO95073 299 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 PLEKHA8P1O95397 391 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 YEATS4O95619 227 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 CD8BP10966 210 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 MALP21145 153 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 U2AF2P26368 475 aaKnown RBP eCLIP7.83□□□□□ -1.16
CNOT1-222ENST00000570139 EEF1GP26641 437 aaKnown RBP7.83□□□□□ -1.16
CNOT1-222ENST00000570139 THBS2P35442 1172 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 PER3P56645 1201 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 TBC1D10BQ4KMP7 808 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-222ENST00000570139 KHDC1LQ5JSQ8 128 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 INTS11Q5TA45 600 aaKnown RBP7.83□□□□□ -1.16
CNOT1-222ENST00000570139 KRT40Q6A162 431 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 MCTP2Q6DN12 878 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 GRAMD4Q6IC98 578 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 RSRC2Q7L4I2 434 aaKnown RBP7.83□□□□□ -1.16
CNOT1-222ENST00000570139 PROSER1Q86XN7 944 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 RAB11FIP4Q86YS3 637 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 CACNA2D3Q8IZS8 1091 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 SRBD1Q8N5C6 995 aaKnown RBP7.83□□□□□ -1.16
CNOT1-222ENST00000570139 BICD2Q8TD16 824 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 SYAP1Q96A49 352 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-222ENST00000570139 IQCDQ96DY2 449 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 RRP36Q96EU6 259 aaKnown RBP7.83□□□□□ -1.16
CNOT1-222ENST00000570139 TEPSINQ96N21 525 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 DMRTA2Q96SC8 542 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 ZNF341Q9BYN7 854 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 DEFB129Q9H1M3 183 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 MYO1AQ9UBC5 1043 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 PAXBP1Q9Y5B6 917 aa7.83□□□□□ -1.16
CNOT1-222ENST00000570139 PAPPA2Q9BXP8 1791 aa7.82□□□□□ -1.16
CNOT1-222ENST00000570139 A0A0A6YYK5 440 aaPredicted RBP7.82□□□□□ -1.16
CNOT1-222ENST00000570139 ESYT2A0FGR8 921 aa7.82□□□□□ -1.16
CNOT1-222ENST00000570139 GLTPD2A6NH11 291 aa7.82□□□□□ -1.16
CNOT1-222ENST00000570139 NUDT19A8MXV4 375 aa7.82□□□□□ -1.16
CNOT1-222ENST00000570139 F8W8V4 182 aa7.82□□□□□ -1.16
CNOT1-222ENST00000570139 J3KRW8 73 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms