RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SGO2Q562F6 1265 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 PADI6Q6TGC4 694 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 CCDC81Q6ZN84 652 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 CHPFQ8IZ52 775 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 ARL14EPQ8N8R7 260 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-216ENST00000567071 CEP120Q8N960 986 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 FAM184AQ8NB25 1140 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 SNX19Q92543 992 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 CCDC97Q96F63 343 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-216ENST00000567071 HIC2Q96JB3 615 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 CYP2S1Q96SQ9 504 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 CCDC113Q9H0I3 377 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 ABI2Q9NYB9 513 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-216ENST00000567071 ARHGAP26Q9UNA1 814 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 TNFSF13BQ9Y275 285 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 ANKRD6Q9Y2G4 727 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 PCDHB6Q9Y5E3 794 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 SNX11Q9Y5W9 270 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 MYOFQ9NZM1 2061 aa10.43□□□□□ -0.74
CAPN3-216ENST00000567071 A0A1W2PQF6 199 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 SLC37A4O43826 429 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 BAG4O95429 457 aaKnown RBP10.42□□□□□ -0.74
CAPN3-216ENST00000567071 CHRM1P11229 460 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-216ENST00000567071 FDPSP14324 419 aaKnown RBP10.42□□□□□ -0.74
CAPN3-216ENST00000567071 HDCP19113 662 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 OXTRP30559 389 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 ACADVLP49748 655 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 HMGN5P82970 282 aaKnown RBP10.42□□□□□ -0.74
CAPN3-216ENST00000567071 DNAJC3Q13217 504 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 ILKQ13418 452 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 C10orf76Q5T2E6 689 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 ADAT2Q7Z6V5 191 aaKnown RBP10.42□□□□□ -0.74
CAPN3-216ENST00000567071 FILIP1Q7Z7B0 1213 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 TRIM22Q8IYM9 498 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 THEM5Q8N1Q8 247 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 KIAA1958Q8N8K9 716 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 IFT74Q96LB3 600 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 AIFM3Q96NN9 605 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 MMS19Q96T76 1030 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 TCHPQ9BT92 498 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 CDT1Q9H211 546 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 KCNMB3Q9NPA1 279 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 THSD1Q9NS62 852 aa10.42□□□□□ -0.74
CAPN3-216ENST00000567071 WSB2Q9NYS7 404 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-216ENST00000567071 METTL12A8MUP2 240 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 PAPSS1O43252 624 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 PRPF3O43395 683 aaKnown RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 XPOTO43592 962 aaKnown RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 SLITRK3O94933 977 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 GCFC2P16383 781 aaKnown RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 ABCB4P21439 1286 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 PAX3P23760 479 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 GRIA4P48058 902 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 AARSP49588 968 aaKnown RBP eCLIP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 ATP2C1P98194 919 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 IL9RQ01113 521 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 MESP2Q0VG99 397 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 NT5DC1Q5TFE4 455 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 KDM7AQ6ZMT4 941 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 METTL23Q86XA0 190 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 SLFN12Q8IYM2 578 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 DCP1BQ8IZD4 617 aaKnown RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 ADGRG2Q8IZP9 1017 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 EXD3Q8N9H8 876 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 TRMT2BQ96GJ1 504 aaKnown RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 MRGPRX1Q96LB2 322 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 SLC22A12Q96S37 553 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 EIF2AK1Q9BQI3 630 aaKnown RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 RNF26Q9BY78 433 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-216ENST00000567071 ZCWPW1Q9H0M4 648 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 SH3GLB2Q9NR46 395 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 VPS54Q9P1Q0 977 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 DEC1Q9P2X7 70 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 TUBGCP4Q9UGJ1 667 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 ADAMTS1Q9UHI8 967 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 DSEQ9UL01 958 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 PCDHB5Q9Y5E4 795 aa10.41□□□□□ -0.74
CAPN3-216ENST00000567071 VPS37CA5D8V6 355 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-216ENST00000567071 H0Y8X5 98 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 K7ERI5 159 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 LEFTY2O00292 366 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
CAPN3-216ENST00000567071 DEXIO95424 95 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 EDN1P05305 212 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 ITGAVP06756 1048 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 MCF2P10911 925 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 ELAVL4P26378 380 aaKnown RBP10.4□□□□□ -0.74
CAPN3-216ENST00000567071 LRPAP1P30533 357 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 DDIT3P35638 169 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 CDR1P51861 262 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 RPL10AP62906 217 aaKnown RBP10.4□□□□□ -0.74
CAPN3-216ENST00000567071 GABREP78334 506 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 GUCY1B3Q02153 619 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 GAD2Q05329 585 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 ORC1Q13415 861 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 PKP1Q13835 747 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 STARD3Q14849 445 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 ZC2HC1CQ53FD0 456 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms