RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 MTRRQ9UBK8 725 aa11.79□□□□□ -0.52
SNX29-204ENST00000564791 TTC7AQ9ULT0 858 aaPredicted RBP11.79□□□□□ -0.52
SNX29-204ENST00000564791 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNX29-204ENST00000564791 PLXNA3P51805 1871 aa11.79□□□□□ -0.52
SNX29-204ENST00000564791 ZNF638Q14966 1978 aaKnown RBP11.79□□□□□ -0.52
SNX29-204ENST00000564791 GREB1Q4ZG55 1949 aa11.79□□□□□ -0.52
SNX29-204ENST00000564791 PLXNA4Q9HCM2 1894 aa11.79□□□□□ -0.52
SNX29-204ENST00000564791 MTMR11A4FU01 709 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ADAM12O43184 909 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 HSF2BPO75031 334 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 VNN2O95498 520 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ZBED1O96006 694 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 USP17L7P0C7H9 530 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 RPL17P18621 184 aaKnown RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 IL1R2P27930 398 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 SDC4P31431 198 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 GRIK1P39086 918 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 GPR15P49685 360 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ATP11AP98196 1134 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ITIH3Q06033 890 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 GPR17Q13304 367 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ACAP1Q15027 740 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ERCC6LQ2NKX8 1250 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ATP13A4Q4VNC1 1196 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 TXNRD3NBQ6F5E7 133 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 RNF19BQ6ZMZ0 732 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 HFE2Q6ZVN8 426 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ARCQ7LC44 396 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 BHLHA9Q7RTU4 235 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 SCN4BQ8IWT1 228 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 FIBCD1Q8N539 461 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 TTC9BQ8N6N2 239 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ATAD1Q8NBU5 361 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 FAM149B1Q96BN6 582 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 OXCT2Q9BYC2 517 aaPredicted RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 ZWILCHQ9H900 591 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 CNGB3Q9NQW8 809 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 CHST7Q9NS84 486 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 RBM12Q9NTZ6 932 aaKnown RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.78□□□□□ -0.52
SNX29-204ENST00000564791 CDY1Q9Y6F8 540 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 SLC4A7Q9Y6M7 1214 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 COL4A4P53420 1690 aaPredicted RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 CARNS1A5YM72 827 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 YJEFN3A6XGL0 299 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 E7ENQ6 273 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 C2CD2LO14523 706 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 TNFRSF10BO14763 440 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 SART1O43290 800 aaKnown RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 RNF8O76064 485 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 KRT1P04264 644 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 LINC00271P0C7V0 271 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 TFE3P19532 575 aaPredicted RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 MIPP30301 263 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 PCK1P35558 622 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 MAGEA11P43364 429 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 PTPN9P43378 593 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 GLUD2P49448 558 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 SLC5A3P53794 718 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ELF2Q15723 593 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 DDR2Q16832 855 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 HADHQ16836 314 aaKnown RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 LONRF2Q1L5Z9 754 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 SDHAF4Q5VUM1 108 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 KIAA1841Q6NSI8 718 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 VSTM1Q6UX27 236 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 DDX53Q86TM3 631 aaKnown RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 DEFB106AQ8N104 65 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 FBXO22Q8NEZ5 403 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 SCAMP5Q8TAC9 235 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 FAM172AQ8WUF8 416 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 UBXN4Q92575 508 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ACSF2Q96CM8 615 aaPredicted RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 SLC2A13Q96QE2 648 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 PEBP4Q96S96 227 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 DDX23Q9BUQ8 820 aaKnown RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 AP1M1Q9BXS5 423 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 NGRNQ9NPE2 291 aaKnown RBP11.78□□□□□ -0.52
SNX29-204ENST00000564791 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 INSL6Q9Y581 213 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 BACE2Q9Y5Z0 518 aa11.78□□□□□ -0.52
SNX29-204ENST00000564791 WDR27A2RRH5 827 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 PI4K2BG5E9Z4 385 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 TRIM66O15016 1216 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 SOAT2O75908 522 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 GLI1P08151 1106 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 ATP2A2P16615 1042 aaKnown RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 PPM1AP35813 382 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 MATKP42679 507 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 YWHAZP63104 245 aaKnown RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 ROR1Q01973 937 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 DSG1Q02413 1049 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 SMARCB1Q12824 385 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 IFRD2Q12894 506 aaPredicted RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 SMTNL2Q2TAL5 461 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms