RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CTNNA1P35221 906 aaKnown RBP10.8□□□□□ -0.68
USP3-219ENST00000561326 TUFMP49411 452 aaKnown RBP10.8□□□□□ -0.68
USP3-219ENST00000561326 PTPROQ16827 1216 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 CCDC142Q17RM4 750 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 ZFYVE27Q5T4F4 411 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 SEL1L2Q5TEA6 688 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 SLC8B1Q6J4K2 584 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 PRSS55Q6UWB4 352 aaPredicted RBP10.8□□□□□ -0.68
USP3-219ENST00000561326 RCOR2Q8IZ40 523 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 NUP93Q8N1F7 819 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 EMC1Q8N766 993 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 ZMIZ2Q8NF64 920 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 SP7Q8TDD2 431 aaPredicted RBP10.8□□□□□ -0.68
USP3-219ENST00000561326 CD101Q93033 1021 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 CARD6Q9BX69 1037 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 ULBP1Q9BZM6 244 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 TMEM51Q9NW97 253 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 COMMD8Q9NX08 183 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 DDX56Q9NY93 547 aaKnown RBP10.8□□□□□ -0.68
USP3-219ENST00000561326 EHD2Q9NZN4 543 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 HSFX1Q9UBD0 423 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 CDY1Q9Y6F8 540 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 CEP290O15078 2479 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 MYO9BQ13459 2157 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 MKI67P46013 3256 aaKnown RBP10.79□□□□□ -0.68
USP3-219ENST00000561326 HHLA1C9JL84 531 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 PGRMC1O00264 195 aaKnown RBP10.79□□□□□ -0.68
USP3-219ENST00000561326 DPYSL4O14531 572 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 ZNF185O15231 689 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 GRAP2O75791 330 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 ZRANB2O95218 330 aaKnown RBP eCLIP10.79□□□□□ -0.68
USP3-219ENST00000561326 LTFP02788 710 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 USP17L7P0C7H9 530 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 ELF1P32519 619 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 NOS2P35228 1153 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 PCK1P35558 622 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 BMPR1AP36894 532 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 MATKP42679 507 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 PTPN9P43378 593 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 NDUFV1P49821 464 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 PEX5P50542 639 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 CDR1P51861 262 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 DAOAP59103 153 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 MGAT5BQ3V5L5 792 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
USP3-219ENST00000561326 RASIP1Q5U651 963 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 PM20D1Q6GTS8 502 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 CCDC70Q6NSX1 233 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 RNF19BQ6ZMZ0 732 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 CREG2Q8IUH2 290 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 ARHGAP18Q8N392 663 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 ATAD1Q8NBU5 361 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 MYRIPQ8NFW9 859 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 ZNF461Q8TAF7 563 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 ACTRT1Q8TDG2 376 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 COG1Q8WTW3 980 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 MAIP1Q8WWC4 291 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 SPATA17Q96L03 361 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 PGLYRP2Q96PD5 576 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 DDX23Q9BUQ8 820 aaKnown RBP10.79□□□□□ -0.68
USP3-219ENST00000561326 RHOBTB2Q9BYZ6 727 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 POPDC2Q9HBU9 364 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 FNIP2Q9P278 1114 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 AFF4Q9UHB7 1163 aaKnown RBP10.79□□□□□ -0.68
USP3-219ENST00000561326 TTC7AQ9ULT0 858 aaPredicted RBP10.79□□□□□ -0.68
USP3-219ENST00000561326 STAP1Q9ULZ2 295 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 LZTS1Q9Y250 596 aa10.79□□□□□ -0.68
USP3-219ENST00000561326 MTMR11A4FU01 709 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 EFCAB8A8MWE9 144 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 LPXNO60711 386 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 DAB1O75553 588 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 CXCL14O95715 111 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 F9P00740 461 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 RB1P06400 928 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 HAPLN1P10915 354 aaPredicted RBP10.78□□□□□ -0.68
USP3-219ENST00000561326 CTNNB1P35222 781 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 FLT3P36888 993 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 CACNA2D1P54289 1103 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 COPS2P61201 443 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 ROR1Q01973 937 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 OGDHQ02218 1023 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 ITIH3Q06033 890 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 ADCY1Q08828 1119 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 DUSP4Q13115 394 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 RAB33AQ14088 237 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 SMC1AQ14683 1233 aaKnown RBP10.78□□□□□ -0.68
USP3-219ENST00000561326 TAF5Q15542 800 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 PPP2R5EQ16537 467 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 DDR2Q16832 855 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 SLC25A52Q3SY17 297 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 CCDC14Q49A88 953 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 BOLA3Q53S33 107 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 DCAF6Q58WW2 860 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 BEND5Q7L4P6 421 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 TMC7Q7Z402 723 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 POLNQ7Z5Q5 900 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 MON1AQ86VX9 555 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 KATNAL2Q8IYT4 538 aa10.78□□□□□ -0.68
USP3-219ENST00000561326 RASGEF1CQ8N431 466 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms