RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CDC16Q13042 620 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 GRM1Q13255 1194 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 Q3C1V9 767 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 TMEM270Q6UE05 265 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 MON1BQ7L1V2 547 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 PLPPR4Q7Z2D5 763 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 ABRAQ8N0Z2 381 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 WDR60Q8WVS4 1066 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 SKA1Q96BD8 255 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 MMP19Q99542 508 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 ACO2Q99798 780 aaKnown RBP14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 DDX50Q9BQ39 737 aaKnown RBP14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 TRIM55Q9BYV6 548 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 NPHS2Q9NP85 383 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 ETNK2Q9NVF9 386 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 ARL8BQ9NVJ2 186 aa14.57□□□□□ -0.08
RABGGTA-220ENST00000560998 EXOC1LA0A1B0GW35 172 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 NOP56O00567 594 aaKnown RBP14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 STRNO43815 780 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 TGDSO95455 350 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 CFHP08603 1231 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 SRGAP2CP0DJJ0 459 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 ESRRAP11474 423 aaPredicted RBP14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 CPA3P15088 417 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 AP3M2P53677 418 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 TMED1Q13445 227 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 MXD4Q14582 209 aaPredicted RBP14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 SCARA3Q6AZY7 606 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 ZBTB33Q86T24 672 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 ZNF554Q86TJ5 538 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 WDR49Q8IV35 697 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 CCDC110Q8TBZ0 833 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 HAUS1Q96CS2 278 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 DGCR14Q96DF8 476 aaKnown RBP14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 HSFX1Q9UBD0 423 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 WASF2Q9Y6W5 498 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 UTRNP46939 3433 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 AP1G1O43747 822 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 TYROBPO43914 113 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 SPAG7O75391 227 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 PRKCBP05771 671 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 CA4P22748 312 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 GNA15P30679 374 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 PGM1P36871 562 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 SLC1A1P43005 524 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 NOMO3P69849 1222 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 CDK16Q00536 496 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 ASPHQ12797 758 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 KCTD2Q14681 263 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 TMCO4Q5TGY1 634 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 LLGL2Q6P1M3 1020 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 AAGABQ6PD74 315 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 B3GNT6Q6ZMB0 384 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 ZBTB8OSQ8IWT0 167 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 FBXO16Q8IX29 292 aaPredicted RBP14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 EXOC8Q8IYI6 725 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 LRRC71Q8N4P6 559 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 UBR7Q8N806 425 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 ZBTB8BQ8NAP8 495 aaPredicted RBP14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 MPP4Q96JB8 637 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 PHACTR1Q9C0D0 580 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 TAS2R1Q9NYW7 299 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 GRID1Q9ULK0 1009 aa14.56□□□□□ -0.08
RABGGTA-220ENST00000560998 A0A0J9YVX5 310 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 CFAP69A5D8W1 941 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 TMEM221A6NGB7 291 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 IDO1P14902 403 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 OSBPP22059 807 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 SERPINB3P29508 390 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 ZNF132P52740 706 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 TTLL12Q14166 644 aaPredicted RBP14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 C2CD6Q53TS8 623 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 MAP3K21Q5TCX8 1036 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 LIN9Q5TKA1 542 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 GPAT2Q6NUI2 795 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 RINLQ6ZS11 566 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 PHF13Q86YI8 300 aaPredicted RBP14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 PASD1Q8IV76 773 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 CCDC89Q8N998 374 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 RNF149Q8NC42 400 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 VCPIP1Q96JH7 1222 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 SPATA33Q96N06 139 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 TCHPQ9BT92 498 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 C2orf40Q9H1Z8 148 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 TBCCD1Q9NVR7 557 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 SLC24A2Q9UI40 661 aa14.55□□□□□ -0.08
RABGGTA-220ENST00000560998 OGTO15294 1046 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 OPHN1O60890 802 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ASS1P00966 412 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 CST3P01034 146 aaPredicted RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 IL1BP01584 269 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 SPATA31D3P0C874 917 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ETS2P15036 469 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 CCNFP41002 786 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ARFIP2P53365 341 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ACTR3P61158 418 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ADCY1Q08828 1119 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 PTP4A2Q12974 167 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 MED21Q13503 144 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 CYLC2Q14093 348 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms