RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 FMO5P49326 533 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 MTAPQ13126 283 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 PON2Q15165 354 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 FOXR2Q6PJQ5 311 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 CLEC20AQ6ZU45 233 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 MAML2Q8IZL2 1156 aaPredicted RBP13.32□□□□□ -0.28
LRRC28-214ENST00000559433 CPA6Q8N4T0 437 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 OSCP1Q8WVF1 389 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 ATP2A3Q93084 1043 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 HEXIM2Q96MH2 286 aaKnown RBP13.32□□□□□ -0.28
LRRC28-214ENST00000559433 HINFPQ9BQA5 517 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 CHRDQ9H2X0 955 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 FBXO44Q9H4M3 255 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 COMMD8Q9NX08 183 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 SMPD4Q9NXE4 827 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 GMIPQ9P107 970 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 WNT6Q9Y6F9 365 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 VPS13AQ96RL7 3174 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 USP34Q70CQ2 3546 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 PRR23AA6NEV1 266 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 OTOL1A6NHN0 477 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 OLFM2O95897 454 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 MBL2P11226 248 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 CHRNB1P11230 501 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 CXCL12P48061 93 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 CCR3P51677 355 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 SLC7A9P82251 487 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 GRSF1Q12849 480 aaKnown RBP eCLIP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 LRMPQ12912 555 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 CUL2Q13617 745 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 PPP1R26Q5T8A7 1209 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 ASCL5Q7RTU5 278 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 GPRIN1Q7Z2K8 1008 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 TMEM176AQ96HP8 235 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 FAM126AQ9BYI3 521 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 RNF38Q9H0F5 515 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 RBM12Q9NTZ6 932 aaKnown RBP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 ZSCAN32Q9NX65 697 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 IL37Q9NZH6 218 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 CHORDC1Q9UHD1 332 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 CPQQ9Y646 472 aa13.31□□□□□ -0.28
LRRC28-214ENST00000559433 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-214ENST00000559433 KIAA1549LQ6ZVL6 1849 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 DMDP11532 3685 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 COCHO43405 550 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 GNA14O95837 355 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 RAD23BP54727 409 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 YWHAEP62258 255 aaKnown RBP13.3□□□□□ -0.28
LRRC28-214ENST00000559433 ZXDBP98169 803 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 CETN1Q12798 172 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 EML3Q32P44 896 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 HECTD3Q5T447 861 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 DDX42Q86XP3 938 aaKnown RBP eCLIP13.3□□□□□ -0.28
LRRC28-214ENST00000559433 SYNPOQ8N3V7 929 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 SLC4A11Q8NBS3 891 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 SECISBP2LQ93073 1101 aaKnown RBP13.3□□□□□ -0.28
LRRC28-214ENST00000559433 SRRTQ9BXP5 876 aaKnown RBP13.3□□□□□ -0.28
LRRC28-214ENST00000559433 NACA2Q9H009 215 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 CLSTN2Q9H4D0 955 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 CCSER2Q9H7U1 834 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 ECT2Q9H8V3 914 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 PNPLA8Q9NP80 782 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 PRMT8Q9NR22 394 aaPredicted RBP13.3□□□□□ -0.28
LRRC28-214ENST00000559433 PCDHGA2Q9Y5H1 932 aa13.3□□□□□ -0.28
LRRC28-214ENST00000559433 ATG2BQ96BY7 2078 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 FAM92AA1XBS5 289 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 HHLA1C9JL84 531 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
LRRC28-214ENST00000559433 CYP26A1O43174 497 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 FGFR1OPO95684 399 aaKnown RBP13.29□□□□□ -0.28
LRRC28-214ENST00000559433 ZDHHC11BP0C7U3 371 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 CCDC192P0DO97 292 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 ACO1P21399 889 aaKnown RBP13.29□□□□□ -0.28
LRRC28-214ENST00000559433 TBXAS1P24557 533 aaPredicted RBP13.29□□□□□ -0.28
LRRC28-214ENST00000559433 TUBP50607 506 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 SNX30Q5VWJ9 437 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 TSSK4Q6SA08 328 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 MAMSTRQ6ZN01 415 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 Q6ZS52 159 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 SPEM1Q8N4L4 309 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 CHFRQ96EP1 664 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 NT5C1BQ96P26 610 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 DUSP16Q9BY84 665 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 TLR8Q9NR97 1041 aaKnown RBP13.29□□□□□ -0.28
LRRC28-214ENST00000559433 CFAP97Q9P2B7 532 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 RWDD2AQ9UIY3 292 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 RAB23Q9ULC3 237 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 SCML2Q9UQR0 700 aa13.29□□□□□ -0.28
LRRC28-214ENST00000559433 MYOFQ9NZM1 2061 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 SLC9A3R1O14745 358 aaPredicted RBP13.28□□□□□ -0.28
LRRC28-214ENST00000559433 PMM2O15305 246 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 P4HA2O15460 535 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 TLR5O60602 858 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 ATG13O75143 517 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 NFATC1O95644 943 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 GJA4P35212 333 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 PGFP49763 221 aa13.28□□□□□ -0.28
LRRC28-214ENST00000559433 MARSP56192 900 aaKnown RBP13.28□□□□□ -0.28
LRRC28-214ENST00000559433 KCNH2Q12809 1159 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1587.3 ms