RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 IQCKQ8N0W5 287 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 CLEC4CQ8WTT0 213 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 MAIP1Q8WWC4 291 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 RXFP2Q8WXD0 754 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 HNRNPABQ99729 332 aaKnown RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 CNPY3Q9BT09 278 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 C11orf84Q9BUA3 381 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 MIS12Q9H081 205 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 DDX56Q9NY93 547 aaKnown RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 CXXC1Q9P0U4 656 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 PTPRSQ13332 1948 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 COL4A4P53420 1690 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 GPD1P21695 349 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 IVDP26440 423 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 RPL9P32969 192 aaKnown RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 PCK1P35558 622 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 GRIK3Q13003 919 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 C15orf59Q2T9L4 293 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 CCDC14Q49A88 953 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 PAN2Q504Q3 1202 aaKnown RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 TIGD5Q53EQ6 642 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 KCNT1Q5JUK3 1230 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 CCDC105Q8IYK2 499 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 URGCPQ8TCY9 931 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-207ENST00000558763 TNIP3Q96KP6 325 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 RUNDC3BQ96NL0 473 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 FAM118BQ9BPY3 351 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 RTP3Q9BQQ7 232 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 CYLDQ9NQC7 956 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 SNX24Q9Y343 169 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 LAMA3Q16787 3333 aa13.58□□□□□ -0.24
SMAD3-207ENST00000558763 TBKBP1A7MCY6 615 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 CLDN5O00501 218 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 BEST1O76090 585 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 TRUB2O95900 331 aaKnown RBP13.57□□□□□ -0.24
SMAD3-207ENST00000558763 CD48P09326 243 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 PTPN1P18031 435 aaKnown RBP13.57□□□□□ -0.24
SMAD3-207ENST00000558763 GGCXP38435 758 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 ARSEP51690 589 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 RNASELQ05823 741 aaKnown RBP13.57□□□□□ -0.24
SMAD3-207ENST00000558763 SNX1Q13596 522 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 CCNG2Q16589 344 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 SLC26A9Q7LBE3 791 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 TMC3Q7Z5M5 1100 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 CMASQ8NFW8 434 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-207ENST00000558763 TOP1MTQ969P6 601 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 SH3GL2Q99962 352 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 ZWILCHQ9H900 591 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 TMEM30AQ9NV96 361 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 TBC1D13Q9NVG8 400 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-207ENST00000558763 PATJQ8NI35 1801 aa13.57□□□□□ -0.24
SMAD3-207ENST00000558763 FNDC1Q4ZHG4 1894 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-207ENST00000558763 LRRD1A4D1F6 860 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 XPO1O14980 1071 aaKnown RBP13.56□□□□□ -0.24
SMAD3-207ENST00000558763 HOXA2O43364 376 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 CAPN15O75808 1086 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ENDOD1O94919 500 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ECEL1O95672 775 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 KRT7P08729 469 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 PDGFRAP16234 1089 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 SCNN1AP37088 669 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 MAGEA10P43363 369 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ADCY1Q08828 1119 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 TFDP3Q5H9I0 405 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ZDHHC17Q8IUH5 632 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 TMEM86AQ8N2M4 240 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 FBXO25Q8TCJ0 367 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 CFAP57Q96MR6 1250 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 CASD1Q96PB1 797 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 DUSP16Q9BY84 665 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 DDX43Q9NXZ2 648 aaKnown RBP13.56□□□□□ -0.24
SMAD3-207ENST00000558763 RASAL2Q9UJF2 1139 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 USP18Q9UMW8 372 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 TIMM13Q9Y5L4 95 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-207ENST00000558763 COL4A6Q14031 1691 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 GOLGA6BA6NDN3 693 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 F8W810 466 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 LIASO43766 372 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 DGKIO75912 1065 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ITGB1P05556 798 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 TFE3P19532 575 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-207ENST00000558763 KDELR1P24390 212 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 PLCB3Q01970 1234 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 KRT17Q04695 432 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 TUSC3Q13454 348 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 PTK6Q13882 451 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 DRICH1Q6PGQ1 229 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-207ENST00000558763 CLEC20AQ6ZU45 233 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ARCQ7LC44 396 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 PIGZQ86VD9 579 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ZNF280BQ86YH2 543 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 HSFY1Q96LI6 401 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ZIM3Q96PE6 472 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 MED4Q9NPJ6 270 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 ASNSD1Q9NWL6 643 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 PCSK1NQ9UHG2 260 aa13.56□□□□□ -0.24
SMAD3-207ENST00000558763 EFR3BQ9Y2G0 817 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms