RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ARHGEF3Q9NR81 526 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 GKN1Q9NS71 199 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 SMPD4Q9NXE4 827 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 EHD2Q9NZN4 543 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 APEX2Q9UBZ4 518 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 MTF2Q9Y483 593 aaPredicted RBP14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 ZDBF2Q9HCK1 2354 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 A0A1W2PQH9 124 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 FAM92AA1XBS5 289 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 GTPBP10A4D1E9 387 aaKnown RBP14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 SHISA7A6NL88 538 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 FOXN3O00409 490 aaPredicted RBP14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 GABBR2O75899 941 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 OAS1P00973 400 aaKnown RBP14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 PAEPP09466 180 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 USP17L7P0C7H9 530 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 ZDHHC11BP0C7U3 371 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 CDK11BP21127 795 aaKnown RBP14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 SOX9P48436 509 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 RGS7P49802 495 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 COPB1P53618 953 aaKnown RBP14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 FCHO2Q0JRZ9 810 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 CNGA2Q16280 664 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 CWF19L1Q69YN2 538 aaKnown RBP14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 LCLAT1Q6UWP7 414 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 SCD5Q86SK9 330 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 FBXL6Q8N531 539 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 SH3RF2Q8TEC5 729 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 DEPDC1BQ8WUY9 529 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 WBP2Q969T9 261 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 E2F7Q96AV8 911 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 FOXQ1Q9C009 403 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 LINC00597Q9H2U6 94 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 COMMD8Q9NX08 183 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 GTSE1Q9NYZ3 720 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 KIAA1257Q9ULG3 409 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 CNTN6Q9UQ52 1028 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 CPQQ9Y646 472 aa14.59□□□□□ -0.07
TSPAN3-205ENST00000558745 SOBPA7XYQ1 873 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 ARNTLO00327 626 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 MDM4O15151 490 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 COCHO43405 550 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 LETM1O95202 739 aaPredicted RBP14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 MBL2P11226 248 aaPredicted RBP14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 ZNF18P17022 549 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 TKTL1P51854 596 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 MLF2Q15773 248 aaPredicted RBP14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 PKDCCQ504Y2 493 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 HECTD3Q5T447 861 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 KLHDC7AQ5VTJ3 777 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 PMF1Q6P1K2 205 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 DENND1BQ6P3S1 775 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 TMEM105Q8N8V8 129 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 IRF7Q92985 503 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 SECISBP2LQ93073 1101 aaKnown RBP14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 FBXO44Q9H4M3 255 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 TBC1D17Q9HA65 648 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 OBP2AQ9NY56 170 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 HESX1Q9UBX0 185 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 LIMA1Q9UHB6 759 aaKnown RBP14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 SCML2Q9UQR0 700 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 FHOD1Q9Y613 1164 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 USP3Q9Y6I4 520 aa14.58□□□□□ -0.08
TSPAN3-205ENST00000558745 NUP210Q8TEM1 1887 aaPredicted RBP14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 FAM170AA1A519 330 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 OTOL1A6NHN0 477 aaPredicted RBP14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 M0QYV0 167 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 LEFTY2O00292 366 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 CHADO15335 359 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 LCP1P13796 627 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 ARSAP15289 507 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 AVPR2P30518 371 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 PPP3CCP48454 512 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 ZNF165P49910 485 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 PFKPQ01813 784 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 BST2Q10589 180 aaKnown RBP14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 ZNF268Q14587 947 aaPredicted RBP14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 IQCB1Q15051 598 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 ZNF77Q15935 545 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 RAB41Q5JT25 222 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 SNX30Q5VWJ9 437 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 TPRG1Q6ZUI0 275 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 APTXQ7Z2E3 356 aaKnown RBP14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 PDZD8Q8NEN9 1154 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 ZNF606Q8WXB4 792 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 OVCA2Q8WZ82 227 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 SHC3Q92529 594 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 ULBP1Q9BZM6 244 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 UBXN6Q9BZV1 441 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 EBF3Q9H4W6 596 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 HPS4Q9NQG7 708 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 ARHGAP26Q9UNA1 814 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 WNT6Q9Y6F9 365 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 ZNF318Q5VUA4 2279 aa14.57□□□□□ -0.08
TSPAN3-205ENST00000558745 XPO1O14980 1071 aaKnown RBP14.56□□□□□ -0.08
TSPAN3-205ENST00000558745 EPHB6O15197 1021 aa14.56□□□□□ -0.08
TSPAN3-205ENST00000558745 THAP12O43422 761 aa14.56□□□□□ -0.08
TSPAN3-205ENST00000558745 OLFM2O95897 454 aa14.56□□□□□ -0.08
TSPAN3-205ENST00000558745 DCNP07585 359 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms