RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 A0A0A0MRY4 1105 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 CST3P01034 146 aaPredicted RBP16.45■□□□□ 0.22
NEDD1-207ENST00000555114 SLC6A11P48066 632 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
NEDD1-207ENST00000555114 IRX4P78413 519 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 KDSRQ06136 332 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 HECTD3Q5T447 861 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 LYSMD4Q5XG99 296 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 SYT12Q8IV01 421 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 GLIS3Q8NEA6 775 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 HMGB4Q8WW32 186 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 HPS3Q969F9 1004 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 INTS4Q96HW7 963 aaKnown RBP16.45■□□□□ 0.22
NEDD1-207ENST00000555114 TNIP3Q96KP6 325 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 MED10Q9BTT4 135 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 NACA2Q9H009 215 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 DPEP3Q9H4B8 488 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 MAGEF1Q9HAY2 307 aa16.45■□□□□ 0.22
NEDD1-207ENST00000555114 THADAQ6YHU6 1953 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 USP24Q9UPU5 2620 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 TCRBV21S2A2A0A5A6 115 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 TBC1D3BA6NDS4 549 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 TMEM8BA6NDV4 472 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 PATE3B3GLJ2 98 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 SGK1O00141 431 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 CDX4O14627 284 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-207ENST00000555114 SCAMP3O14828 347 aaKnown RBP16.44■□□□□ 0.22
NEDD1-207ENST00000555114 GIPC1O14908 333 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 SPTLC2O15270 562 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 HOXD12P35452 270 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 KIR2DL1P43626 348 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-207ENST00000555114 TUBP50607 506 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 ATXN3P54252 364 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-207ENST00000555114 LY6G5CQ5SRR4 150 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 EPM2AIP1Q7L775 607 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-207ENST00000555114 RABEPKQ7Z6M1 372 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 RLN3Q8WXF3 142 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 DHX58Q96C10 678 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 ZNF396Q96N95 335 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-207ENST00000555114 B3GNT5Q9BYG0 378 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 DMAP1Q9NPF5 467 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-207ENST00000555114 COMMD8Q9NX08 183 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 DEC1Q9P2X7 70 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 NUP205Q92621 2012 aa16.44■□□□□ 0.22
NEDD1-207ENST00000555114 ABCA7Q8IZY2 2146 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 PTPRDP23468 1912 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 CLDN5O00501 218 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 CLIC2O15247 247 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 AP5Z1O43299 807 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 COCHO43405 550 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 PPP6R2O75170 966 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 TRIM21P19474 475 aaKnown RBP16.43■□□□□ 0.22
NEDD1-207ENST00000555114 HOXD13P35453 343 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 AP3M2P53677 418 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 MYL6P60660 151 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 BIRC3Q13489 604 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 E2F4Q16254 413 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 CNNM4Q6P4Q7 775 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 SLC36A4Q6YBV0 504 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 UNC13DQ70J99 1090 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 ARMCX6Q7L4S7 300 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 C12orf40Q86WS4 652 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 NELFCDQ8IXH7 590 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 TMEFF1Q8IYR6 380 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 LINC00301Q8NCQ3 95 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 CEP76Q8TAP6 659 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 SMARCD1Q96GM5 515 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 DUSP9Q99956 384 aaKnown RBP16.43■□□□□ 0.22
NEDD1-207ENST00000555114 ADAM33Q9BZ11 813 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
NEDD1-207ENST00000555114 C1QTNF9BB2RNN3 333 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 HOXC11O43248 304 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-207ENST00000555114 STX6O43752 255 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 EXOC3O60645 756 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-207ENST00000555114 C1QTNF9P0C862 333 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 P4HA1P13674 534 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 HNRNPLP14866 589 aaKnown RBP eCLIP16.42■□□□□ 0.22
NEDD1-207ENST00000555114 RDXP35241 583 aaKnown RBP16.42■□□□□ 0.22
NEDD1-207ENST00000555114 MAPK8P45983 427 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 SLC5A3P53794 718 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 CACNA2D1P54289 1103 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 GOLGA8FQ08AF8 430 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 GOLGA8DPQ0D2H9 430 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 ANO4Q32M45 955 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 ZNF699Q32M78 642 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 ZNF667Q5HYK9 610 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 EMC10Q5UCC4 262 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 SNX30Q5VWJ9 437 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 SDE2Q6IQ49 451 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 FAM35AQ86V20 835 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 C12orf56Q8IXR9 622 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 HDDC3Q8N4P3 179 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 ZNF513Q8N8E2 541 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-207ENST00000555114 DEFB124Q8NES8 71 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 GOLGA5Q8TBA6 731 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 C7orf25Q9BPX7 421 aa16.42■□□□□ 0.22
NEDD1-207ENST00000555114 VRTNQ9H8Y1 702 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms