RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 XPO1O14980 1071 aaKnown RBP19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 MBL2P11226 248 aaPredicted RBP19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 COL9A1P20849 921 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 ZNF165P49910 485 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 KIF11P52732 1056 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 APBA1Q02410 837 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 PRKCQQ04759 706 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 PDE4CQ08493 712 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 SLC44A4Q53GD3 710 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 LCLAT1Q6UWP7 414 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 TFAP2BQ92481 460 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 BPIFA3Q9BQP9 254 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 UBXN6Q9BZV1 441 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 TBC1D17Q9HA65 648 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 DNAJC12Q9UKB3 198 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 ARHGAP26Q9UNA1 814 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 CNTN6Q9UQ52 1028 aa19.48■□□□□ 0.71
PRPF40B-216ENST00000552301 KRBA1A5PL33 1030 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 CYP26A1O43174 497 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 MED7O43513 233 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 OAS1P00973 400 aaKnown RBP19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 GNA15P30679 374 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 TUBP50607 506 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 COPB1P53618 953 aaKnown RBP19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 USP4Q13107 963 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 RAPGEF1Q13905 1077 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 MTF1Q14872 753 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 CNGA2Q16280 664 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 TPRG1Q6ZUI0 275 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 UBA3Q8TBC4 463 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 SH3RF2Q8TEC5 729 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 SIX2Q9NPC8 291 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 TRPV5Q9NQA5 729 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 SMPD4Q9NXE4 827 aa19.47■□□□□ 0.71
PRPF40B-216ENST00000552301 THAP12O43422 761 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 ZDHHC11BP0C7U3 371 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 PSEN1P49768 467 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 KPNA1P52294 538 aaPredicted RBP19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 SLC7A9P82251 487 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 NCAPHQ15003 741 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 SNX30Q5VWJ9 437 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 SMYD5Q6GMV2 418 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 CCDC186Q7Z3E2 898 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 TADA2BQ86TJ2 420 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 DDX42Q86XP3 938 aaKnown RBP eCLIP19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 SIX6OS1Q8N1H7 587 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 ARHGAP18Q8N392 663 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 SHC3Q92529 594 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 ZFYVE19Q96K21 471 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 PCMTD1Q96MG8 357 aaPredicted RBP19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 LRRC3BQ96PB8 259 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 HEBP1Q9NRV9 189 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 LIMA1Q9UHB6 759 aaKnown RBP19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 NAGPAQ9UK23 515 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 HCN4Q9Y3Q4 1203 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 CPQQ9Y646 472 aa19.46■□□□□ 0.71
PRPF40B-216ENST00000552301 LGALS16A8MUM7 142 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 COCHO43405 550 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 TLR5O60602 858 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 OLFM2O95897 454 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 CALCAP01258 141 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 RALAP11233 206 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 ZNF18P17022 549 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 PLA2G4AP47712 749 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 IFNAR2P48551 515 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 TKTL1P51854 596 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 TPM4P67936 248 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 ADIGQ0VDE8 80 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 KCNMA1Q12791 1236 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 PDGFRLQ15198 375 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 ZNF77Q15935 545 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 ASTLQ6HA08 431 aaPredicted RBP19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 SECISBP2LQ93073 1101 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 FUCA2Q9BTY2 467 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 CCSER2Q9H7U1 834 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 GKN1Q9NS71 199 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 RAPGEFL1Q9UHV5 662 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 MRPS17Q9Y2R5 130 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 USP3Q9Y6I4 520 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 PIAS3Q9Y6X2 628 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 HELZP42694 1942 aaKnown RBP19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 TICRRQ7Z2Z1 1910 aa19.45■□□□□ 0.7
PRPF40B-216ENST00000552301 A0A1W2PQH9 124 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 LEFTY2O00292 366 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 TULP2O00295 520 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 MAN2B1O00754 1011 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 TCF3P15923 654 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 CLCN5P51795 746 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 STARD6P59095 220 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 PTK2Q05397 1052 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 RAB41Q5JT25 222 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 KLHDC7AQ5VTJ3 777 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 CWF19L1Q69YN2 538 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 MSANTD3Q96H12 275 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 CDK5RAP1Q96SZ6 601 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 ZSWIM1Q9BR11 485 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 RNF38Q9H0F5 515 aa19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 DUS2Q9NX74 493 aaKnown RBP19.44■□□□□ 0.7
PRPF40B-216ENST00000552301 FHOD1Q9Y613 1164 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms