RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 PAFAH1B1P43034 410 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 MAGEA11P43364 429 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 GLUD2P49448 558 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 TERF1P54274 439 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 DAOAP59103 153 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 DSG1Q02413 1049 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 SMARCB1Q12824 385 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 ACAP1Q15027 740 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 C15orf59Q2T9L4 293 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-213ENST00000550064 SH3PXD2AQ5TCZ1 1133 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 RASIP1Q5U651 963 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 SLC8B1Q6J4K2 584 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 AADACL2Q6P093 401 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 VSTM1Q6UX27 236 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 ARCQ7LC44 396 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 ZNF572Q7Z3I7 529 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-213ENST00000550064 CTAGE6Q86UF2 777 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 CTAGE4Q8IX94 777 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
CACNB3-213ENST00000550064 ACTRT1Q8TDG2 376 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 C8orf48Q96LL4 319 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 DDX23Q9BUQ8 820 aaKnown RBP12.71□□□□□ -0.37
CACNB3-213ENST00000550064 MTIF3Q9H2K0 278 aaKnown RBP12.71□□□□□ -0.37
CACNB3-213ENST00000550064 PNPLA8Q9NP80 782 aa12.71□□□□□ -0.37
CACNB3-213ENST00000550064 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNB3-213ENST00000550064 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNB3-213ENST00000550064 LCHNA4D1U4 455 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 YJEFN3A6XGL0 299 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 E7ENQ6 273 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 TNFRSF10BO14763 440 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 LRCH4O75427 683 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 DAB1O75553 588 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 RNF8O76064 485 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 FGF18O76093 207 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 ZBED1O96006 694 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 GLI1P08151 1106 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 PYGMP11217 842 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 SDC4P31431 198 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 GJC1P36383 396 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 PTPN9P43378 593 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 GPR15P49685 360 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 YWHAZP63104 245 aaKnown RBP12.7□□□□□ -0.38
CACNB3-213ENST00000550064 ROR1Q01973 937 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 DDR2Q16832 855 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 ATP13A4Q4VNC1 1196 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 RAB6CQ53S08 254 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 LRRC38Q5VT99 294 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 SDHAF4Q5VUM1 108 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 PM20D1Q6GTS8 502 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 HFE2Q6ZVN8 426 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 KATNAL2Q8IYT4 538 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 DEFB106AQ8N104 65 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 VPS52Q8N1B4 723 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 SCML4Q8N228 414 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 SCAMP5Q8TAC9 235 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 SPPL2BQ8TCT7 592 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 C2orf15Q8WU43 125 aaKnown RBP12.7□□□□□ -0.38
CACNB3-213ENST00000550064 IRGQQ8WZA9 623 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 CLP1Q92989 425 aaKnown RBP12.7□□□□□ -0.38
CACNB3-213ENST00000550064 FAM149B1Q96BN6 582 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 RNPC3Q96LT9 517 aaKnown RBP12.7□□□□□ -0.38
CACNB3-213ENST00000550064 CFAP57Q96MR6 1250 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 CLSTN3Q9BQT9 956 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 RAB6CQ9H0N0 254 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 CRISPLD1Q9H336 500 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 TTC7AQ9ULT0 858 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-213ENST00000550064 SLC27A5Q9Y2P5 690 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 USP3Q9Y6I4 520 aa12.7□□□□□ -0.38
CACNB3-213ENST00000550064 UQCRHLA0A096LP55 91 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 WDR27A2RRH5 827 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 PGRMC1O00264 195 aaKnown RBP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 TRIM66O15016 1216 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 SART1O43290 800 aaKnown RBP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 CTIFO43310 598 aaKnown RBP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 TRUB2O95900 331 aaKnown RBP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 URODP06132 367 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 FYNP06241 537 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 UQCRHP07919 91 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 HAPLN1P10915 354 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 MIPP30301 263 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 GTF2F1P35269 517 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 PCK1P35558 622 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 MATKP42679 507 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 SLC5A3P53794 718 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 ATP11AP98196 1134 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 SLC25A11Q02978 314 aaKnown RBP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 KRT17Q04695 432 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 CDO1Q16878 200 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 TXNRD3NBQ6F5E7 133 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 BHLHA9Q7RTU4 235 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 KLHL23Q8NBE8 558 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 FAM172AQ8WUF8 416 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 SLC2A13Q96QE2 648 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 C11orf84Q9BUA3 381 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 ZWILCHQ9H900 591 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNB3-213ENST00000550064 PCSK1NQ9UHG2 260 aa12.69□□□□□ -0.38
CACNB3-213ENST00000550064 V9GYY5 206 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms