RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SPATC1LQ9H0A9 340 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 KLC4Q9NSK0 619 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 CKBP12277 381 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 RFX3P48380 749 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 STARD3Q14849 445 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 LOC100653049A0A140TA62 436 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 KRT34O76011 436 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 SERPINB8P50452 374 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 TFDP3Q5H9I0 405 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 CBWD1Q9BRT8 395 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 RMND5AQ9H871 391 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 DCDC2Q9UHG0 476 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 AP4E1Q9UPM8 1137 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 HPS5Q9UPZ3 1129 aa17.38■□□□□ 0.37
SCARB1-205ENST00000538291 MANSC4A6NHS7 340 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 CYP11B1P15538 503 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 RAG1P15918 1043 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 DNAJB2P25686 324 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 CXCL9Q07325 125 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 MRPL28Q13084 256 aaKnown RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 TRIP10Q15642 601 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 Q4G0T1 1027 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 FBXO47Q5MNV8 452 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 MMGT1Q8N4V1 131 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 ZNF333Q96JL9 665 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 CNPY3Q9BT09 278 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 KRCC1Q9NPI7 259 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 TLR8Q9NR97 1041 aaKnown RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 TECPR2O15040 1411 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PBLDP30039 288 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PCYT1AP49585 367 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 BST2Q10589 180 aaKnown RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 DDX42Q86XP3 938 aaKnown RBP eCLIP17.37■□□□□ 0.378e-9■□□□□ 10.6
SCARB1-205ENST00000538291 TMEM176AQ96HP8 235 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PDCD2LQ9BRP1 358 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 ZSCAN32Q9NX65 697 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 ERVK-10P10266 1014 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PDIA6Q15084 440 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PLCL1Q15111 1095 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 NT5DC4Q86YG4 428 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 DDX28Q9NUL7 540 aaKnown RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 CBX4O00257 560 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 CYTH3O43739 400 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 TGFB3P10600 412 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 GUCA1AP43080 201 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 SLC16A1P53985 500 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 TRIM60Q495X7 471 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 WLSQ5T9L3 541 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 TBKBP1A7MCY6 615 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PRR23D1E9PI22 279 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PDHXO00330 501 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 ZBTB39O15060 712 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 CTDNEP1O95476 244 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 LSM8O95777 96 aaKnown RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PRR23D2P0DMB1 279 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 TGM3Q08188 693 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 PLD1Q13393 1074 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 KCNT1Q5JUK3 1230 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 TMEM245Q9H330 911 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 AGO4Q9HCK5 861 aaKnown RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 RAD18Q9NS91 495 aa17.37■□□□□ 0.37
SCARB1-205ENST00000538291 THG1LQ9NWX6 298 aaKnown RBP17.37■□□□□ 0.37
SCARB1-205ENST00000538291 CASTOR2A6NHX0 329 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 RASSF9O75901 435 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 CASP4P49662 377 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 SLC29A2Q14542 456 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 FAM131BQ86XD5 332 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 SYTL5Q8TDW5 730 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-205ENST00000538291 CNDP1Q96KN2 507 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 SERPINB12Q96P63 405 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 SETD4Q9NVD3 440 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 CXCL11O14625 94 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 HERVK_113P62684 666 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 LAMTOR4Q0VGL1 99 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 GIT2Q14161 759 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 ARID3BQ8IVW6 561 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-205ENST00000538291 ATP8B4Q8TF62 1192 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 NFKBIZQ9BYH8 718 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 PCDHB5Q9Y5E4 795 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 V9GYQ6 96 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 CAMSAP1Q5T5Y3 1602 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 CHI3L1P36222 383 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-205ENST00000538291 TKTL1P51854 596 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 CSTF3Q12996 717 aaKnown RBP17.36■□□□□ 0.37
SCARB1-205ENST00000538291 RETSATQ6NUM9 610 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 GPATCH2LQ9NWQ4 482 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 ITGA11Q9UKX5 1188 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 RUVBL2Q9Y230 463 aaKnown RBP17.36■□□□□ 0.37
SCARB1-205ENST00000538291 EIF4E1BA6NMX2 242 aaKnown RBP17.36■□□□□ 0.37
SCARB1-205ENST00000538291 STRNO43815 780 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 ZNF286BP0CG31 522 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 PTPN11Q06124 597 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-205ENST00000538291 SLC9A5Q14940 896 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 OVOS1Q6IE37 1185 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 FAM83AQ86UY5 434 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 C3orf20Q8ND61 904 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 SLC20A1Q8WUM9 679 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 RTFDC1Q9BY42 306 aaPredicted RBP17.36■□□□□ 0.37
SCARB1-205ENST00000538291 OSGEPL1Q9H4B0 414 aa17.36■□□□□ 0.37
SCARB1-205ENST00000538291 NCF1BA6NI72 391 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms