RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 PDE4CQ08493 712 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 CWF19L1Q69YN2 538 aaKnown RBP23.42■■□□□ 1.34
VPS37C-202ENST00000535818 ASTLQ6HA08 431 aaPredicted RBP23.42■■□□□ 1.34
VPS37C-202ENST00000535818 TPRG1Q6ZUI0 275 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 PIGZQ86VD9 579 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 UBA3Q8TBC4 463 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 TFAP2BQ92481 460 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 UBXN6Q9BZV1 441 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 NACA2Q9H009 215 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 TRPV5Q9NQA5 729 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 ARHGAP26Q9UNA1 814 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 SCML2Q9UQR0 700 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 HCN4Q9Y3Q4 1203 aa23.42■■□□□ 1.34
VPS37C-202ENST00000535818 TICRRQ7Z2Z1 1910 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 M0QYV0 167 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 XPO1O14980 1071 aaKnown RBP23.41■■□□□ 1.34
VPS37C-202ENST00000535818 CALCAP01258 141 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 SETSIPP0DME0 302 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 VCPP55072 806 aaKnown RBP23.41■■□□□ 1.34
VPS37C-202ENST00000535818 USP4Q13107 963 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 MTF1Q14872 753 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 FKBP15Q5T1M5 1219 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 LCLAT1Q6UWP7 414 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 SH3RF2Q8TEC5 729 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 RNF38Q9H0F5 515 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 SIX2Q9NPC8 291 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 DNAJC12Q9UKB3 198 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.41■■□□□ 1.34
VPS37C-202ENST00000535818 CNTN6Q9UQ52 1028 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 CPQQ9Y646 472 aa23.41■■□□□ 1.34
VPS37C-202ENST00000535818 HELZP42694 1942 aaKnown RBP23.41■■□□□ 1.34
VPS37C-202ENST00000535818 SYCE3A1L190 88 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 OLFM2O95897 454 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 ZDHHC11BP0C7U3 371 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 COL9A1P20849 921 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 CLCN5P51795 746 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 KPNA1P52294 538 aaPredicted RBP23.4■■□□□ 1.34
VPS37C-202ENST00000535818 STARD6P59095 220 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 SLC7A9P82251 487 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 ZNF77Q15935 545 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 CNGA2Q16280 664 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 SNX30Q5VWJ9 437 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 CCDC186Q7Z3E2 898 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 LSM14BQ9BX40 385 aaKnown RBP23.4■■□□□ 1.34
VPS37C-202ENST00000535818 CCSER2Q9H7U1 834 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 LRRC4Q9HBW1 653 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 GKN1Q9NS71 199 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 SMPD4Q9NXE4 827 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 PIAS3Q9Y6X2 628 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 TRIOO75962 3097 aa23.4■■□□□ 1.34
VPS37C-202ENST00000535818 SMTNL1A8MU46 457 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 TULP2O00295 520 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 ARNTLO00327 626 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 COCHO43405 550 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 TLR5O60602 858 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 AOC1P19801 751 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 AVPR2P30518 371 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 GNA15P30679 374 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 TUBP50607 506 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 NCAPHQ15003 741 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 TTC8Q8TAM2 541 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 RIN3Q8TB24 985 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 SHC3Q92529 594 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 BPIFA3Q9BQP9 254 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 NAGPAQ9UK23 515 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 COL4A2P08572 1712 aa23.39■■□□□ 1.33
VPS37C-202ENST00000535818 A0A1W2PQH9 124 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 KANSL1LA0AUZ9 987 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 LEFTY2O00292 366 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 THAP12O43422 761 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 MED7O43513 233 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 TCF3P15923 654 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 PLA2G4AP47712 749 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 IFNAR2P48551 515 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 PSEN1P49768 467 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 TKTL1P51854 596 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 COPB1P53618 953 aaKnown RBP23.38■■□□□ 1.33
VPS37C-202ENST00000535818 KCNMA1Q12791 1236 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 RAPGEF1Q13905 1077 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 UBXN2BQ14CS0 331 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 RAB41Q5JT25 222 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 ZNF852Q6ZMS4 543 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 DDX42Q86XP3 938 aaKnown RBP eCLIP23.38■■□□□ 1.33
VPS37C-202ENST00000535818 SIX6OS1Q8N1H7 587 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 TMEM105Q8N8V8 129 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 SECISBP2LQ93073 1101 aaKnown RBP23.38■■□□□ 1.33
VPS37C-202ENST00000535818 ZSWIM1Q9BR11 485 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 FOXQ1Q9C009 403 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 GTSE1Q9NYZ3 720 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 LIMA1Q9UHB6 759 aaKnown RBP23.38■■□□□ 1.33
VPS37C-202ENST00000535818 USP3Q9Y6I4 520 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 COL4A3Q01955 1670 aa23.38■■□□□ 1.33
VPS37C-202ENST00000535818 KMT2EQ8IZD2 1858 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 KIF26AQ9ULI4 1882 aaPredicted RBP23.37■■□□□ 1.33
VPS37C-202ENST00000535818 BECN2A8MW95 431 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 MAN2B1O00754 1011 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 CD72P21854 359 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 PGFP49763 221 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 ZNF165P49910 485 aa23.37■■□□□ 1.33
VPS37C-202ENST00000535818 TNK2Q07912 1038 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms