RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CREBBPQ92793 2442 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 SFI1A8K8P3 1242 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 SLC9A3R1O14745 358 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 XPOTO43592 962 aaKnown RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 FAM189A1O60320 539 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 BRINP1O60477 761 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 TULP3O75386 442 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 ADH1CP00326 375 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 ADRB2P07550 413 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 PAX3P23760 479 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 GRK6P43250 576 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 CSNK1EP49674 416 aaKnown RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 SF3A1Q15459 793 aaKnown RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 NFE2Q16621 373 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 PKDCCQ504Y2 493 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 ARHGAP40Q5TG30 622 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 DCAF12L1Q5VU92 463 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 KIAA1324Q6UXG2 1013 aaKnown RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 ZPBP2Q6X784 338 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 USP49Q70CQ1 688 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 ERICH1Q86X53 443 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 CHPFQ8IZ52 775 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 FSIP1Q8NA03 581 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 ERMNQ8TAM6 284 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 TTC9Q92623 222 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 NRSN2Q9GZP1 204 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 CPNE5Q9HCH3 593 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 WSB2Q9NYS7 404 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 CFAP97Q9P2B7 532 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 NXF1Q9UBU9 619 aaKnown RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 EIF2B4Q9UI10 523 aaKnown RBP8.89□□□□□ -0.99
CLIP1-206ENST00000535290 SNX11Q9Y5W9 270 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 CPQQ9Y646 472 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 LRRK2Q5S007 2527 aa8.89□□□□□ -0.99
CLIP1-206ENST00000535290 OBSL1O75147 1896 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 METTL12A8MUP2 240 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 CBX4O00257 560 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 XBP1P17861 261 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 ACAT1P24752 427 aaKnown RBP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 HNF1BP35680 557 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 KRT2P35908 639 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 MATR3P43243 847 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 SLC7A9P82251 487 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 TSPY1Q01534 308 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 STRN3Q13033 797 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 PDIA5Q14554 519 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 DIEXFQ68CQ4 756 aaKnown RBP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 CPLX2Q6PUV4 134 aaKnown RBP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 PRICKLE2Q7Z3G6 844 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 SCN4BQ8IWT1 228 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 KIAA1958Q8N8K9 716 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 TERB1Q8NA31 727 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 TMEM161BQ8NDZ6 487 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 CADM4Q8NFZ8 388 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 LEO1Q8WVC0 666 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 MED8Q96G25 268 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 ZNF274Q96GC6 653 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 NAF1Q96HR8 494 aaKnown RBP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 PKMYT1Q99640 499 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 GABRG3Q99928 467 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 NTPCRQ9BSD7 190 aaKnown RBP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 RUSC1Q9BVN2 902 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 RPF1Q9H9Y2 349 aaKnown RBP8.88□□□□□ -0.99
CLIP1-206ENST00000535290 ABCB6Q9NP58 842 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 DEC1Q9P2X7 70 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 FTSJ1Q9UET6 329 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 KIAA1024Q9UPX6 916 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 STARD13Q9Y3M8 1113 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 MYOFQ9NZM1 2061 aa8.88□□□□□ -0.99
CLIP1-206ENST00000535290 ZNF840PA6NDX5 716 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 KCNJ18B7U540 433 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 WASH3PC4AMC7 463 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 HCRTO43612 131 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 PCDHGA12O60330 932 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 MAPTP10636 758 aaKnown RBP8.87□□□□□ -0.99
CLIP1-206ENST00000535290 ADSSP30520 456 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 MCM7P33993 719 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 ACTN2P35609 894 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 CCT6AP40227 531 aaKnown RBP8.87□□□□□ -0.99
CLIP1-206ENST00000535290 TAF6P49848 677 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 PDE6CP51160 858 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 USP46P62068 366 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 IL9RQ01113 521 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 GAD2Q05329 585 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 DNAJC3Q13217 504 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 TBC1D25Q3MII6 688 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 KCNT1Q5JUK3 1230 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 HES3Q5TGS1 186 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 SDE2Q6IQ49 451 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 LAYNQ6UX15 382 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 SPIRE2Q8WWL2 714 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 ZFRQ96KR1 1074 aaKnown RBP8.87□□□□□ -0.99
CLIP1-206ENST00000535290 TSPAN18Q96SJ8 248 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 LGMNQ99538 433 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 CCSER1Q9C0I3 900 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 TRPM5Q9NZQ8 1165 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 GTF3C4Q9UKN8 822 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 PCDHGA1Q9Y5H4 931 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms