RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ALDH1A3P47895 512 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 TUBB4BP68371 445 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 MXRA7P84157 204 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 OCA2Q04671 838 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 MTM1Q13496 603 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 CUL3Q13618 768 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 CUL4BQ13620 913 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 KCTD2Q14681 263 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 MAPRE1Q15691 268 aaKnown RBP4.35□□□□□ -1.71
CTR9-205ENST00000529898 TRIM71Q2Q1W2 868 aaKnown RBP4.35□□□□□ -1.71
CTR9-205ENST00000529898 TSHZ3Q63HK5 1081 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 EGFLAMQ63HQ2 1017 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 GPR149Q86SP6 731 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 LURAP1LQ8IV03 231 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 CMTR2Q8IYT2 770 aaKnown RBP4.35□□□□□ -1.71
CTR9-205ENST00000529898 LRRC43Q8N309 656 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 NUP133Q8WUM0 1156 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 VOPP1Q96AW1 172 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 ZMAT2Q96NC0 199 aaKnown RBP4.35□□□□□ -1.71
CTR9-205ENST00000529898 ANKRD27Q96NW4 1050 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 ADI1Q9BV57 179 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 CAPS2Q9BXY5 557 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 CCDC68Q9H2F9 335 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 RNPEPQ9H4A4 650 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 SYNCQ9H7C4 482 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 ZNF304Q9HCX3 659 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 TCF7L2Q9NQB0 619 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 TMEM140Q9NV12 185 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 CORO1CQ9ULV4 474 aaPredicted RBP4.35□□□□□ -1.71
CTR9-205ENST00000529898 NOSIPQ9Y314 301 aaKnown RBP4.35□□□□□ -1.71
CTR9-205ENST00000529898 DAAM1Q9Y4D1 1078 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 GPR45Q9Y5Y3 372 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 ZNF644Q9H582 1327 aaPredicted RBP4.35□□□□□ -1.71
CTR9-205ENST00000529898 PDS5BQ9NTI5 1447 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 SYNJ2O15056 1496 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 MRC2Q9UBG0 1479 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 FAM135AQ9P2D6 1515 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 SYNMO15061 1565 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 SHROOM2Q13796 1616 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 SHPRHQ149N8 1683 aa4.35□□□□□ -1.71
CTR9-205ENST00000529898 hCG_2014768A0A024R1R8 64 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 MYADML2A6NDP7 307 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 UNC119BA6NIH7 251 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 KIAA0355O15063 1070 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 LSM1O15116 133 aaKnown RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 POLR3GO15318 223 aaPredicted RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 BIRC5O15392 142 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 MGEA5O60502 916 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 NEMFO60524 1076 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 ATP6V1G1O75348 118 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 PRSS23O95084 383 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 RPSAP08865 295 aaKnown RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 TSPY4P0CV99 314 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 TSPY10P0CW01 314 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 PNMA6AP0CW24 399 aaPredicted RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 CCDC166P0CW27 439 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 FPR1P21462 350 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 RANBP1P43487 201 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 AMPHP49418 695 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 CLNS1AP54105 237 aaKnown RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 PER3P56645 1201 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 IFFO1Q0D2I5 559 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 IKQ13123 557 aaPredicted RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 DHX8Q14562 1220 aaKnown RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 NOMO1Q15155 1222 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 CCDC142Q17RM4 750 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 ZSCAN23Q3MJ62 389 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 COLEC12Q5KU26 742 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 DACT2Q5SW24 774 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 AKNAD1Q5T1N1 836 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 TMCO3Q6UWJ1 677 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 ATF7IPQ6VMQ6 1270 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 TMEM110Q86TL2 294 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 ADGRG3Q86Y34 549 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 CCDC146Q8IYE0 955 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 GALNT15Q8N3T1 639 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 CEP112Q8N8E3 955 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 MSANTD4Q8NCY6 345 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 SIMC1Q8NDZ2 872 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 NEK11Q8NG66 645 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 OR2I1PQ8NGU4 316 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 RASSF8Q8NHQ8 419 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 EXOC6Q8TAG9 804 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 STON2Q8WXE9 905 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 GCC1Q96CN9 775 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 GPATCH3Q96I76 525 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 EPSTI1Q96J88 318 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 NEK1Q96PY6 1258 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 UHRF1Q96T88 793 aaPredicted RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 CGREF1Q99674 301 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 OSBPL10Q9BXB5 764 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 MOV10L1Q9BXT6 1211 aaKnown RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 LRRC27Q9C0I9 530 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 SENP6Q9GZR1 1112 aaPredicted RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 REXO4Q9GZR2 422 aaKnown RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 KIF9Q9HAQ2 790 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 FBXO34Q9NWN3 711 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 TRMT1Q9NXH9 659 aaKnown RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 CHPF2Q9P2E5 772 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms