RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ZNF487B1APH4 448 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 ZBTB42B2RXF5 422 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 TRDMT1O14717 391 aaKnown RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 USP2O75604 605 aaPredicted RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 TGM2P21980 687 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 TNFAIP2Q03169 654 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 GAD2Q05329 585 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 POU5F1BQ06416 359 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 CDK18Q07002 472 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 FSTL1Q12841 308 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 KRT72Q14CN4 511 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 PRKD1Q15139 912 aaPredicted RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 DARS2Q6PI48 645 aaKnown RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 BZW1Q7L1Q6 419 aaKnown RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 MTDHQ86UE4 582 aaKnown RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 LRRC39Q96DD0 335 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 ADPGKQ9BRR6 497 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 DCLRE1BQ9H816 532 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 MKS1Q9NXB0 559 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 TCRBV7S3A2A0A539 114 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 TCRBV9S1A1TA0A576 114 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 AP1G2O75843 785 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 TOMM70O94826 608 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 MICAL2O94851 1124 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 HAUS5O94927 633 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 ATP5BP06576 529 aaKnown RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 CD48P09326 243 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 TPBGLP0DKB5 382 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 GPD1P21695 349 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 ELK3P41970 407 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 MAGEA6P43360 314 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 FAM187BQ17R55 369 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 LGSNQ5TDP6 509 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 TTC39BQ5VTQ0 682 aaPredicted RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 ZNF449Q6P9G9 518 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 SH2D5Q6ZV89 423 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 SLC26A11Q86WA9 606 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD7-202ENST00000524602 GPR20Q99678 358 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 CALN1Q9BXU9 219 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 MMADHCQ9H3L0 296 aaPredicted RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 ASB7Q9H672 318 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 SIX4Q9UIU6 781 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 CHMP2BQ9UQN3 213 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 PAPPA2Q9BXP8 1791 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 EME2A4GXA9 379 aaPredicted RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 CBX6O95503 412 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 STAU1O95793 577 aaKnown RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 GPD2P43304 727 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 ARFIP2P53365 341 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 CDK16Q00536 496 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 VGLL4Q14135 290 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 STILQ15468 1287 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 RAB3IL1Q8TBN0 382 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 AFG1LQ8WV93 481 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 TEKT4Q8WW24 435 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 HSPH1Q92598 858 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 SKA1Q96BD8 255 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 NUDCD1Q96RS6 583 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 BTBD10Q9BSF8 475 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 PRMT7Q9NVM4 692 aaPredicted RBP8.66□□□□□ -1.02
CHD7-202ENST00000524602 SLC17A7Q9P2U7 560 aa8.66□□□□□ -1.02
CHD7-202ENST00000524602 ADM5C9JUS6 153 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 M0QYV0 167 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 KRT37O76014 449 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 KRT19P08727 400 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 MCF2P10911 925 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 DESP17661 470 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 CALRP27797 417 aaKnown RBP8.65□□□□□ -1.02
CHD7-202ENST00000524602 EPHB2P29323 1055 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 PLEKHG4Q58EX7 1191 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 FAM102AQ5T9C2 384 aaPredicted RBP8.65□□□□□ -1.02
CHD7-202ENST00000524602 EMC1Q8N766 993 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 C1orf127Q8N9H9 656 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 MTBPQ96DY7 904 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 PTCD3Q96EY7 689 aaKnown RBP8.65□□□□□ -1.02
CHD7-202ENST00000524602 NSL1Q96IY1 281 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 TBCBQ99426 244 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 CDT1Q9H211 546 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 SPON1Q9HCB6 807 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 CNTN3Q9P232 1028 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 TJP2Q9UDY2 1190 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 PCSK1NQ9UHG2 260 aa8.65□□□□□ -1.02
CHD7-202ENST00000524602 C2CD4BA6NLJ0 364 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 KBTBD13C9JR72 458 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 NOP56O00567 594 aaKnown RBP8.65□□□□□ -1.03
CHD7-202ENST00000524602 DPYSL4O14531 572 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 PRPSAP2O60256 369 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 RAP1GAPP47736 663 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 CDH6P55285 790 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 MBTD1Q05BQ5 628 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 INCA1Q0VD86 236 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 TAF11Q15544 211 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 KBTBD12Q3ZCT8 623 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 BOLA3Q53S33 107 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 CELF3Q5SZQ8 465 aaKnown RBP8.65□□□□□ -1.03
CHD7-202ENST00000524602 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.65□□□□□ -1.03
CHD7-202ENST00000524602 RFWD2Q8NHY2 731 aa8.65□□□□□ -1.03
CHD7-202ENST00000524602 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms