RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 CDH6P55285 790 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 MAP3K7CLP57077 242 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 YWHAZP63104 245 aaKnown RBP10.43□□□□□ -0.74
VPS13B-212ENST00000524330 KRT17Q04695 432 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 DSC1Q08554 894 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 ADIGQ0VDE8 80 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 KLF1Q13351 362 aaPredicted RBP10.43□□□□□ -0.74
VPS13B-212ENST00000524330 PTK6Q13882 451 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 BYSLQ13895 437 aaKnown RBP10.43□□□□□ -0.74
VPS13B-212ENST00000524330 IKBKEQ14164 716 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 CDO1Q16878 200 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 ARL13BQ3SXY8 428 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 CCDC14Q49A88 953 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 KAZNQ674X7 775 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 ZNF280DQ6N043 979 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 AADACL2Q6P093 401 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 FAM171BQ6P995 826 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 MFSD7Q6UXD7 560 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 CLEC20AQ6ZU45 233 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 BBS12Q6ZW61 710 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 PDZD4Q76G19 769 aaPredicted RBP10.43□□□□□ -0.74
VPS13B-212ENST00000524330 PCGF5Q86SE9 256 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 COLGALT2Q8IYK4 626 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 ARHGAP18Q8N392 663 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 FAM71BQ8TC56 605 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 C1orf54Q8WWF1 131 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 HSPH1Q92598 858 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 MYLPFQ96A32 169 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 SNF8Q96H20 258 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 FUBP3Q96I24 572 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS13B-212ENST00000524330 DDX23Q9BUQ8 820 aaKnown RBP10.43□□□□□ -0.74
VPS13B-212ENST00000524330 CALN1Q9BXU9 219 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 B3GNT5Q9BYG0 378 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 CRISPLD2Q9H0B8 497 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 DPH5Q9H2P9 285 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 POPDC2Q9HBU9 364 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 CRTAC1Q9NQ79 661 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 TBC1D13Q9NVG8 400 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 PCSK1NQ9UHG2 260 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 ZNF148Q9UQR1 794 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 FAN1Q9Y2M0 1017 aa10.43□□□□□ -0.74
VPS13B-212ENST00000524330 SF3B1O75533 1304 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS13B-212ENST00000524330 CFAP69A5D8W1 941 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 PI4K2BG5E9Z4 385 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 PIK3R2O00459 728 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 TRIM66O15016 1216 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 NBNO60934 754 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 ATP2C2O75185 946 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 GRAP2O75791 330 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 CXCL10P02778 98 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 TGM2P21980 687 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 FLT3P36888 993 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 ADCY8P40145 1251 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 BRCC3P46736 316 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 SULT1E1P49888 294 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 ATP11AP98196 1134 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 SNX1Q13596 522 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 MBTPS1Q14703 1052 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 MTFR1Q15390 333 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 SIX1Q15475 284 aaPredicted RBP10.42□□□□□ -0.74
VPS13B-212ENST00000524330 SLC25A52Q3SY17 297 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 CLLU1OSQ5K130 101 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 ERMARDQ5T6L9 678 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 CNKSR3Q6P9H4 555 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 C4orf22Q6V702 233 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 RTN4RL1Q86UN2 441 aaPredicted RBP10.42□□□□□ -0.74
VPS13B-212ENST00000524330 CPNE8Q86YQ8 564 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 LRRC43Q8N309 656 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 RSAD2Q8WXG1 361 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 PCED1BQ96HM7 432 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 SLC9A7Q96T83 725 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 ZNF670Q9BS34 389 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 TMEM106CQ9BVX2 250 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 CSNK1G1Q9HCP0 422 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS13B-212ENST00000524330 TMEM39AQ9NV64 488 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 RCOR3Q9P2K3 495 aaPredicted RBP10.42□□□□□ -0.74
VPS13B-212ENST00000524330 TJP2Q9UDY2 1190 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 HPCAL4Q9UM19 191 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 NME7Q9Y5B8 376 aa10.42□□□□□ -0.74
VPS13B-212ENST00000524330 TIMM13Q9Y5L4 95 aaPredicted RBP10.42□□□□□ -0.74
VPS13B-212ENST00000524330 ESYT3A0FGR9 886 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 MYBPHLA2RUH7 354 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 GOLGA8KD6RF30 607 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 H3BRJ5 948 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 APOC4-APOC2K7ER74 178 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 TULP2O00295 520 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 CLDN5O00501 218 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 APOL1O14791 398 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 LIASO43766 372 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 CST8O60676 142 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 OAZ2O95190 189 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 ZBED1O96006 694 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 MYCP01106 439 aaPredicted RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 KRT14P02533 472 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 APOC2P02655 101 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 ITGAVP06756 1048 aa10.41□□□□□ -0.74
VPS13B-212ENST00000524330 TKTP29401 623 aaKnown RBP10.41□□□□□ -0.74
VPS13B-212ENST00000524330 STIP1P31948 543 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms