RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 SOAT2O75908 522 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 ABLIM3O94929 683 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 RTN3O95197 1032 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-208ENST00000520561 GJB6O95452 261 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 VNN2O95498 520 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 ZBED1O96006 694 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 GLUD1P00367 558 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 GLI1P08151 1106 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 ATF2P15336 505 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 GPD1P21695 349 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 PSMA2P25787 234 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 CASQ1P31415 396 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 ALDH1A3P47895 512 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 GPR15P49685 360 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 DAOAP59103 153 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 ERVFC1P60507 584 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 SMAD3P84022 425 aaKnown RBP9.4□□□□□ -0.9
CSMD1-208ENST00000520561 IFRD2Q12894 506 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-208ENST00000520561 MESDQ14696 234 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 DDR2Q16832 855 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 PPP1R15BQ5SWA1 713 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 SYT10Q6XYQ8 523 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 CCDC149Q6ZUS6 474 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 DENND5BQ6ZUT9 1274 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 SCUBE3Q8IX30 993 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 NUP93Q8N1F7 819 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 SCML4Q8N228 414 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 FNIP1Q8TF40 1166 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 ZNF592Q92610 1267 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 SPATA17Q96L03 361 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 NAPGQ99747 312 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-208ENST00000520561 CRISPLD1Q9H336 500 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 FBXO44Q9H4M3 255 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 CERS4Q9HA82 394 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 COMMD8Q9NX08 183 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 EHD2Q9NZN4 543 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 DNAI1Q9UI46 699 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 FBXW11Q9UKB1 542 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 SLC27A5Q9Y2P5 690 aa9.4□□□□□ -0.9
CSMD1-208ENST00000520561 MYO16Q9Y6X6 1858 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 TMEM191CA6NGB0 347 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 HIDE1A8MVS5 230 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 DPYSL4O14531 572 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 TNFRSF10BO14763 440 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 CAPN9O14815 690 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 SPOPO43791 374 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 GRAP2O75791 330 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 GABBR2O75899 941 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 PROSCO94903 275 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 SEC24AO95486 1093 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 FTCDO95954 541 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 LTFP02788 710 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 USP17L7P0C7H9 530 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 DNAJB1P25685 340 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 YWHAQP27348 245 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 SDC4P31431 198 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 MAN1A1P33908 653 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 SLC1A1P43005 524 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 EPHB3P54753 998 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 RNASE9P60153 205 aaKnown RBP9.39□□□□□ -0.91
CSMD1-208ENST00000520561 RPL7AP62424 266 aaKnown RBP9.39□□□□□ -0.91
CSMD1-208ENST00000520561 MLLT1Q03111 559 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-208ENST00000520561 PIGHQ14442 188 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-208ENST00000520561 TAF12Q16514 161 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 PTPROQ16827 1216 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 SDHAF4Q5VUM1 108 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 ELMSAN1Q6PJG2 1045 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 PEX26Q7Z412 305 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 TCEAL8Q8IYN2 117 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 ARHGAP18Q8N392 663 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 EMC1Q8N766 993 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 MRPL43Q8N983 215 aaKnown RBP9.39□□□□□ -0.91
CSMD1-208ENST00000520561 LRRC57Q8N9N7 239 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 KIF18AQ8NI77 898 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 JOSD2Q8TAC2 188 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 GDPD5Q8WTR4 605 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 CLEC4CQ8WTT0 213 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 UBE2Q2Q8WVN8 375 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 FBXO32Q969P5 355 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 PIWIL1Q96J94 861 aaKnown RBP9.39□□□□□ -0.91
CSMD1-208ENST00000520561 BTBD6Q96KE9 485 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 POPDC2Q9HBU9 364 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 TMEM59LQ9UK28 342 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 AMFRQ9UKV5 643 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 STAP1Q9ULZ2 295 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 JRKLQ9Y4A0 524 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 INSL5Q9Y5Q6 135 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 USP3Q9Y6I4 520 aa9.39□□□□□ -0.91
CSMD1-208ENST00000520561 A0A1W2PPC1 479 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 C2CD4BA6NLJ0 364 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 SPDYE4A6NLX3 237 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 SLC38A8A6NNN8 435 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 TGM5O43548 720 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 RNF8O76064 485 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 C1RP00736 705 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 LRG1P02750 347 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 CSH1P0DML2 217 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 CSH2P0DML3 217 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 PDGFRAP16234 1089 aa9.38□□□□□ -0.91
CSMD1-208ENST00000520561 ATF6P18850 670 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms