RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 PCDHGC5Q9Y5F6 944 aa18.35■□□□□ 0.53
RNF4-209ENST00000507784 PATJQ8NI35 1801 aa18.35■□□□□ 0.53
RNF4-209ENST00000507784 TMEM191CA6NGB0 347 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 C2orf71A6NGG8 1288 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 HIDE1A8MVS5 230 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 PRRG1O14668 218 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 ZBED1O96006 694 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 ATF2P15336 505 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 SLC5A3P53794 718 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 HADHBP55084 474 aaKnown RBP18.34■□□□□ 0.53
RNF4-209ENST00000507784 TAF5Q15542 800 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 PPP1R15BQ5SWA1 713 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 OLFML1Q6UWY5 402 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 SYCE1Q8N0S2 351 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 EMC1Q8N766 993 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 MRPL43Q8N983 215 aaKnown RBP18.34■□□□□ 0.53
RNF4-209ENST00000507784 SCAMP5Q8TAC9 235 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 FAM149B1Q96BN6 582 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 PIWIL1Q96J94 861 aaKnown RBP18.34■□□□□ 0.53
RNF4-209ENST00000507784 WDR24Q96S15 920 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 TRIM7Q9C029 511 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 GOLPH3Q9H4A6 298 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 CNGB3Q9NQW8 809 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 IP6K2Q9UHH9 426 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 USTQ9Y2C2 406 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 HYOU1Q9Y4L1 999 aa18.34■□□□□ 0.53
RNF4-209ENST00000507784 FSCN2O14926 492 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 FTCDO95954 541 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 GPD1P21695 349 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 RFC1P35251 1148 aaPredicted RBP18.33■□□□□ 0.52
RNF4-209ENST00000507784 IRS1P35568 1242 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 ALDH1A3P47895 512 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 DAOAP59103 153 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 GOLGA1Q92805 767 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 AMFRQ9UKV5 643 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 PLXNA3P51805 1871 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 MYO16Q9Y6X6 1858 aa18.33■□□□□ 0.52
RNF4-209ENST00000507784 SLC38A8A6NNN8 435 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 TNFRSF10BO14763 440 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 TGM5O43548 720 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 PSMA2P25787 234 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 SSR1P43307 286 aaKnown RBP18.32■□□□□ 0.52
RNF4-209ENST00000507784 MLLT1Q03111 559 aaPredicted RBP18.32■□□□□ 0.52
RNF4-209ENST00000507784 TAF12Q16514 161 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 PDE12Q6L8Q7 609 aaKnown RBP18.32■□□□□ 0.52
RNF4-209ENST00000507784 DENND5BQ6ZUT9 1274 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 PEX26Q7Z412 305 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 RXFP2Q8WXD0 754 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 TIFAQ96CG3 184 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 SPATA17Q96L03 361 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 TMEM59LQ9UK28 342 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 MAGED2Q9UNF1 606 aaPredicted RBP18.32■□□□□ 0.52
RNF4-209ENST00000507784 YIPF1Q9Y548 306 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 IRAK3Q9Y616 596 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 ALG6Q9Y672 507 aa18.32■□□□□ 0.52
RNF4-209ENST00000507784 CTAGE9A4FU28 777 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 ENC1O14682 589 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 SART1O43290 800 aaKnown RBP18.31■□□□□ 0.52
RNF4-209ENST00000507784 NCK2O43639 380 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 SPOPO43791 374 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 PROSCO94903 275 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 RTN3O95197 1032 aaPredicted RBP18.31■□□□□ 0.52
RNF4-209ENST00000507784 PDGFRAP16234 1089 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 DESP17661 470 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 COMTP21964 271 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 SCNN1AP37088 669 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 DNA2P51530 1060 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 OGDHQ02218 1023 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 MTMR3Q13615 1198 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 CAMK1Q14012 370 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 C11orf63Q6NUN7 778 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 SLC26A9Q7LBE3 791 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 DEFB106AQ8N104 65 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 LRRC57Q8N9N7 239 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 GDPD5Q8WTR4 605 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 IRGQQ8WZA9 623 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 KHSRPQ92945 711 aaKnown RBP eCLIP18.31■□□□□ 0.52
RNF4-209ENST00000507784 NAPGQ99747 312 aaPredicted RBP18.31■□□□□ 0.52
RNF4-209ENST00000507784 FBXO44Q9H4M3 255 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 RRAGDQ9NQL2 400 aaPredicted RBP18.31■□□□□ 0.52
RNF4-209ENST00000507784 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.31■□□□□ 0.52
RNF4-209ENST00000507784 HSFX1Q9UBD0 423 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 LCMT1Q9UIC8 334 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 MAFFQ9ULX9 164 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 USP3Q9Y6I4 520 aa18.31■□□□□ 0.52
RNF4-209ENST00000507784 YJEFN3A6XGL0 299 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 E7ENQ6 273 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 CAPN9O14815 690 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 HSF2BPO75031 334 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 GLUD1P00367 558 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 LTFP02788 710 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 ATF6P18850 670 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 YWHAQP27348 245 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 SDC4P31431 198 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 YWHAZP63104 245 aaKnown RBP18.3■□□□□ 0.52
RNF4-209ENST00000507784 SMAD3P84022 425 aaKnown RBP18.3■□□□□ 0.52
RNF4-209ENST00000507784 TWF1Q12792 350 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 PIGHQ14442 188 aaPredicted RBP18.3■□□□□ 0.52
RNF4-209ENST00000507784 VEPH1Q14D04 833 aa18.3■□□□□ 0.52
RNF4-209ENST00000507784 PM20D1Q6GTS8 502 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms